Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 83 Aligned Residues 341 % Identity 19% Template c3jw7E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	.	.	.	.	.	.	.	.	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	K	Q	V	H	V	R	A	S	K	I	K	L	K	E	T	F	T	I	A	L	G	T	I	E	S	A	D	S	A	I	V	E	I	E	T	E	E	G	L	V	G	Y	G	E	G	G	P	G	I	F	I	T	G	E	T	L	A	G	T	L	E	T	I	E	L	F	G	Q	A	I	I	G	L	N	P	F	N	I
Template Known Secondary structure																						T	T																T	T	S																																S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.	.
Template Sequence		E	K	I	H	E	V	M	D	K	I	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	P	A	A	K	A	A	I	D	I	A	C	Y	D	L	M	G	Q	K	A	Q	L	P	L	Y	Q	L	L	G	.	G	Y	D	N	Q	V	I	T	D	I	T	L	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																					T	S	B					T	T	.		S		S										.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	E	P	N	V	M	A	Q	K	A	V	E	K	V	K	L	.	G	F	D	T	L	K	I	K	V	G	T	.	G	I	E	A	D	I	A	R	V	K	A	I	R	E	A	V	G	F	D	I	K	L	R	L	D	A	N	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T	.	T										S	.																		T	T	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.
Template SS confidence
																							137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.
Predicted Secondary structure																	.																																																													.
Query SS confidence																	.																																																													.
Query Sequence		W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W
Query Conservation																	.																																																													.
Alig confidence																	.														.	.	.	.																																												.
Template Conservation																															.	.	.	.
Template Sequence		W	T	P	K	D	A	V	K	A	I	Q	A	L	A	D	Y	Q	I	E	L	V	E	Q	P	V	K	R	R	D	.	.	.	.	L	E	G	L	K	Y	V	T	S	Q	V	N	T	T	I	M	A	D	E	S	C	F	D	A	Q	D	A	L	E	L	V	K	K	G	T	V	D	V	I	N	I	K	L	M	K	C	G
Template Known Secondary structure		S												T	G	G	G									S		T	T		.	.	.	.												S	S					S	T	T			S											T			S										T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	.	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P
Query Conservation																											.
Alig confidence																											.																						.
Template Conservation																																																	.
Template Sequence		G	I	H	E	A	L	K	I	N	Q	I	C	E	T	A	G	I	E	C	M	I	G	C	M	A	E	E	T	T	I	G	I	T	A	A	A	H	L	A	A	A	Q	K	N	I	T	R	.	A	D	L	D	A	T	F	G	L	E	T	A	P	V	T	G	G	V	S	L	E	A	K	P	L	L	E	L	G	E	A	A
Template Known Secondary structure		S															T									T	T																	T	T				.					G	G	G	G	B	S	S		S	S	S	B	S	S		S				S						S	S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		397	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	G	I	S	I
Template Known Secondary structure		B	T		B
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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