Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 21 Aligned Residues 339 % Identity 21% Template c3i6eA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase i; PDBTitle: crystal structure of muconate lactonizing enzyme from2 ruegeria pomeroyi. Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	.	.	.	.	.	.	.	.	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	I	A	M	D	L	W	H	L	A	L	P	V	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	V	L	R	L	V	A	E	G	G	A	E	G	F	G	E	A	S	P	W	A	V	F	T	G	T	P	E	A	S	Y	A	A	L	D	R	Y	L	R	P	L	V	I	G	R	R	V	G	D	R
Template Known Secondary structure		B																.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S											T	T	T	T													T	T					T	T		B	G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.														.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.															.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.															.	.	.	.	.	.	.	.
Template Sequence		V	A	I	M	D	E	A	A	R	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	C	T	E	A	K	A	A	L	D	S	A	L	L	D	L	A	G	R	I	S	N	L	P	V	W	A	L	L	G	.	G	K	C	R	D	T	I	P	L	S	C	S	I	A	.	.	.	.	.	.	.	.
Template Known Secondary structure												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																					T		B					T	T	.			S		S				B						.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.															.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	P	Q	A	R	I	T	L	D	P	N	G	A	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	D	F	D	A	D	I	A	L	M	E	R	L	R	A	D	.	G	V	G	L	I	K	L	K	T	G	F	R	D	H	A	F	D	I	M	R	L	E	L	I	A	R	D	F	P	E	F	R	V	R	V	D	Y	N	Q	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S															.	T									S	S	S																	T	T	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.
Predicted Secondary structure																.																																																													.
Query SS confidence																.																																																													.
Query Sequence		S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W	T
Query Conservation																.																																																													.
Alig confidence																.														.	.	.	.																																												.
Template Conservation																														.	.	.	.
Template Sequence		E	I	D	E	A	V	P	R	V	L	D	V	A	Q	F	Q	P	D	F	I	E	Q	P	V	R	A	H	H	.	.	.	.	F	E	L	M	A	R	L	R	G	L	T	D	V	P	L	L	A	D	E	S	V	Y	G	P	E	D	M	V	R	A	A	H	E	G	I	C	D	G	V	S	I	K	I	M	K	S	G	G
Template Known Secondary structure			G	G	G										T	T			S						S		T	T		.	.	.	.									T	T		S	S					S	T	T			S											T			S										T	S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	R	A	Q	T	V	A	R	I	A	A	A	H	G	L	M	A	Y	G	G	D	M	F	E	A	G	L	A	H	L	A	G	T	H	M	I	A	A	T	P	E	I	T	L	G	C	E	F	Y	Q	A	S	Y	F	L	N	E	D	I	L	E	T	P	F	R	V	E	A	G	Q	V	I	V	P	D	G	P	G	L
Template Known Secondary structure															T	T									S															T		T	T													T		S	S		S	B	S	S						T	T							S	S	B	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	R	A	D	P	E	K	L	E	H	Y
Template Known Secondary structure		S	S		B
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions