|   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | V | V | R | L | A | E | A | A | Y | E | K | Y | G | F | N | D | F | K | L | K | G | G | V | L | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | E | A | E | S | I | V | A | L | A | Q | R | F | P | Q | A | R | I | T | L | D | P | N | G | A | W | S |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|
|   |   |
| . |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
A | A | F | R | R | G | A | E | N | A | R | A | A | . |
G | F | D | G | V | E | V | H | G | A | N | G | Y | L | L | D | Q | F | L | Q | D | S | A | N | R | R | T | D | A | Y | G | G | S | I | E | N | R | A | R | L | L | L | E | V | V | D | A | A | I | D | V | W | S | A | A | R | V | G | V | H | L | A | P | R | G | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  | S | T | T | T |
|
|
|
| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |
| T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | |
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | N | E | A | I | K | I | G | K | Y | L | K | G | . |
S | L | A | Y | A | E | D | P | C | G | A | E | Q | G | F | S | G | R | E | V | M | A | E | F | R | R | A | T | G | L | P | T | A | T | N | M | I | A | T | D | W | R | Q | M | G | H | T | L | S | L | Q | S | V | D | I | P | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |
|
|   | . |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|   |   | . |
|   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |
Template Sequence |   |
A | H | T | M | G | D | S | D | P | A | A | T | F | G | H | V | A | R | E | L | G | R | R | R | I | A | F | L | F | A | R | E | S | F | G | G | . |
. |
. |
. |
D | A | I | G | Q | Q | L | K | A | A | F | G | G | P | F | I | V | N | E | N | F | . |
T | L | D | S | A | Q | A | A | L | D | A | G | Q | A | D | A | V | A |
Template Known Secondary structure |   |
S | S | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S | T | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  | S | S |
| . |
|  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
|
|
|
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
  |
  |   |
312 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
A |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
W |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
315 |
  |