Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 31 Aligned Residues 353 % Identity 19% Template c3fv9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	.	.	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	.	.	.	.	.	.	.	.	.	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L
Query Conservation																																.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	T	R	I	D	I	H	R	T	D	L	P	V	R	G	G	V	Y	R	L	S	G	G	R	E	Y	H	S	Y	D	A	T	I	V	S	I	E	T	D	T	G	L	T	G	W	G	E	S	T	P	F	G	S	T	Y	I	A	A	H	A	G	G	T	R	A	A	L	E	L	L	A	P	A	I	L	G	M	D	P
Template Known Secondary structure															B	S	S	S					G	G	G				S												T	T	S										S	T	T	S	S	S	S																		T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.
Template Sequence		R	Q	H	D	R	I	W	D	R	M	R	D	T	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	R	D	A	R	A	A	L	D	I	A	C	W	D	I	A	A	Q	A	A	G	L	P	L	C	D	M	T	G	.	G	R	V	A	G	P	V	P	V	I	S	S	I	G	.	.	.	.	.
Template Known Secondary structure		T														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																					T		B	G	G	G	T	T	T	.				S	S		B								.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.
Predicted Secondary structure																																																									.	.	.	.																.
Query SS confidence																																																									.	.	.	.																.
Query Sequence		K	A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	.	.	.	.	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I
Query Conservation																																																									.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.	.	.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	P	E	A	M	R	A	K	V	A	R	H	R	A	Q	.	G	F	K	G	H	S	I	K	I	G	A	S	E	A	E	G	G	P	A	L	D	A	E	R	I	T	A	C	L	A	D	R	Q	P	G	E	W	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	.	T												T	T	T	T														T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																										141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L
Query Conservation																								.
Alig confidence																								.											.	.		.	.	.	.
Template Conservation																																			.	.		.	.	.	.
Template Sequence		L	A	D	A	N	N	G	L	T	V	E	H	A	L	R	M	L	S	L	L	P	P	G	L	D	I	V	L	E	A	P	C	A	.	.	S	.	.	.	.	W	A	E	T	K	S	L	R	A	R	C	A	L	P	L	L	L	D	E	L	I	Q	T	E	T	D	L	I	A	A	I	R	D	D	L	C	D	G	V	G
Template Known Secondary structure						T	T														S		S	S										S	.	.	S	.	.	.	.									T	T			S					S	T	T			S										T	T			S
Template Predicted Secondary structure																																			.	.		.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		312	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	D	P	.	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V
Query Conservation					.
Alig confidence					.																																																									.
Template Conservation																																																														.
Template Sequence		L	K	V	S	K	Q	G	G	I	T	P	M	L	R	Q	R	A	I	A	A	A	A	G	M	V	M	S	V	Q	D	T	V	G	S	Q	I	S	F	A	A	I	L	H	L	A	Q	S	T	P	R	H	L	L	R	C	A	L	D	T	R	.	A	M	T	T	A	E	L	A	E	I	D	A	P	L	R	D	G	G	A
Template Known Secondary structure								T	S															T								S	S															T	S		T	T	T							G	G	.	G	T	B				S							S	B	T	T	B	B
Template Predicted Secondary structure																																																														.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A	H	E	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	P	S	D	P	G	L	G	L	R	V	N	R	D	A	L	G	T	P	V	K	T	F
Template Known Secondary structure						S	S	B	T						G	G	G	T		S		S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions