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Job DescriptionP0AES2
Confidence100.00%DateThu Jan 5 11:24:05 GMT 2012
Rank71Aligned Residues346
% Identity23%Templatec2zc8B_
PDB info PDB header:metal binding proteinChain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGG. . . . . . . . . . EKIRKTLED. AIPLVVGKTL
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Template Sequence  RIEAAELRILELPLKFRFETSFGVQTKRTILLLRL. FGEGLEGLGEGVMERLPLYREETVAGARYLLEEVFLPRVLGRDL
Template Known Secondary structure  B

TT.TT


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BTTT
B
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   2.......10.........20.........30...... ...40.........50.........60.........70.........80
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  GEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNR
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Template Sequence  PNPEALREALAP. . . . . . . . . . . . . . . . FRGNPMAKAVLEMAFFDLWAKALGRPLWQVLG. GV. RQAVEVGVSLGIQP. .
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   81........90.. .......100.........110.........120.... .. ...130.........140
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  KATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . SVEDTLRVVERHLEE. GYRRIKLKIKP. . . GWDYEVLKAVREAFPEATLTADAN
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   141........150..... ....160...... ...170.........180.........190
 
   238.240.........250.........260.........270.........280.........290.........300.........310.... ..
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Query Sequence  GAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADP. HF
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Template Sequence  SAYSLANLAQLKRLDELRLDYIEQPLAYDD. . . . LLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARL
Template Known Secondary structure  T


GGGGGGGT
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   191........200.........210.........220 .........230.........240.........250.........260......
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  WTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKP
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Template Sequence  GGHGESLRVHALAESAGIPLWMGGMLEAGVGRAHNLHLATLPGFTKP. GDVSSASRYWEEDIVEEALEAKDGLMPVPEGV
Template Known Secondary structure  TSTT







TTSTTB
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   267..270.........280.........290.........300.........310... ......320.........330.........340.....
 
   397..400.........410
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Query Sequence  GLGVEIDMDQVMKA
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Template Sequence  GIGVHLKLPFVERV
Template Known Secondary structure  BT


B
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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