Job Description P0AES2 Confidence 37.17% Date Thu Jan 5 11:24:05 GMT 2012 Rank 304 Aligned Residues 177 % Identity 12% Template c2z1dA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis Resolution 2.07 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																					.	.					.	.	.
Query SS confidence																																					.	.					.	.	.
Query Sequence		I	V	A	L	A	Q	R	F	P	Q	A	R	I	T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	.	S	L	A	Y	.	.	.	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D
Query Conservation																																					.	.					.	.	.
Alig confidence																.	.	.	.	.	.																.	.					.	.	.										.	.	.	.
Template Conservation																.	.	.	.	.	.																																		.	.	.	.
Template Sequence		F	A	D	L	K	S	E	G	F	D	V	R	I	V	.	.	.	.	.	.	Y	G	I	F	D	T	Y	R	I	A	K	E	N	P	D	K	T	V	V	H	F	S	P	G	F	E	T	T	T	A	P	A	A	.	.	.	.	G	M	L	N	V	A	A	Q	E	E	L	E	N	F	K	I	Y	S	V	H	R	L	T
Template Known Secondary structure								T	T							.	.	.	.	.	.	S	S												T	T	S																		.	.	.	.										T		S	S
Template Predicted Secondary structure																.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		295	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360						.	.	.	.	.	.	.	.
Predicted Secondary structure														.																																																							.	.	.	.	.
Query SS confidence														.																																																							.	.	.	.	.
Query Sequence		W	R	Q	M	G	H	T	L	S	L	Q	S	.	V	D	I	P	L	A	D	P	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	.	.	.	.	.	K	I	T	A	I	D	T	H
Query Conservation														.																																																							.	.	.	.	.
Alig confidence														.																																																							.	.	.	.	.
Template Conservation
Template Sequence		P	P	A	V	E	V	L	L	K	Q	G	T	V	F	Q	G	L	I	A	P	G	H	V	S	T	I	I	G	V	K	G	W	E	Y	L	T	E	K	Y	G	I	P	Q	V	V	A	G	F	E	P	N	D	V	L	M	A	I	L	M	L	I	R	M	Y	K	E	G	E	A	R	I	I	N	E	Y	E	R	A	V	K
Template Known Secondary structure											T	S				S													T	T																			S	S																	T	T							S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	.	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		Y	E	G	N	V	V	A	Q	K	M	I	D	K	F	F	E	V	V	D	A	K	W	R	A	L	G	V	F	P	K	S	G	L	E	L	R	K	E	W
Template Known Secondary structure		T	T																					T	T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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