Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 53 Aligned Residues 352 % Identity 17% Template c2podA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243 Resolution 2.34 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	T	L	.	.	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V	L	T	L
Query Conservation																																																											.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	E	I	E	T	L	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	F	P	N	L	L	W	V	L	V	H	T	D	E	G	I	T	G	L	G	E	T	F	Y	G	A	C	S	A	E	A	Y	I	H	E	W	A	A	N	R	L	I	G	E	D	P	L	Q	I	D	R	H	A	K	R
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T									T	T	S									S												T	T					T	T	S		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.															.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P	Y	Q	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																																	.																										.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																																	.																										.	.	.
Template Sequence		L	S	G	Y	L	G	F	R	S	.	.	.	.	.	.	.	.	.	.	A	G	A	E	X	R	G	N	S	A	L	D	I	A	L	W	D	I	F	G	K	A	T	G	Q	P	I	Y	Q	L	L	G	.	G	K	C	R	D	T	I	R	T	Y	N	T	C	A	G	P	H	Y	A	R	Y	D	D	L	N	.	.	.
Template Known Secondary structure		T			S	S	S	T	T	T	.	.	.	.	.	.	.	.	.	.	T																							T		B					T	T	.			S		S																					.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																	.																										.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210														.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	L	H	R	A	D	E	L	A	L	D	L	L	D	S	.	G	I	T	A	X	K	I	W	P	F	D	P	Y	A	E	A	S	D	G	Y	Y	I	S	K	S	D	L	K	R	A	L	E	P	F	E	K	I	R	R	A	V	G	D	K	X	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	T								T	T	G	G	G	S	G	G	G	T	T	S											T										T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
																		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L
Query Conservation																								.
Alig confidence																								.														.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		X	V	E	F	H	S	L	W	N	L	P	P	A	L	Q	I	A	E	A	L	R	E	Y	E	T	F	W	H	E	D	P	I	R	X	D	S	.	.	.	.	L	S	S	L	K	R	Y	A	E	R	S	L	A	P	V	C	A	S	E	T	L	A	T	R	W	G	F	R	D	L	L	E	T	N	A	A	G	I	V	X
Template Known Secondary structure						T	T															G	G	G	T		S				S		S		S	S	S	.	.	.	.	G	G	G							T		S	S						T	T													T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		312	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	D	P	.	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V
Query Conservation					.
Alig confidence					.																												.
Template Conservation																																	.
Template Sequence		L	D	I	S	W	C	G	G	L	S	E	A	R	K	I	A	S	X	A	E	A	W	H	L	P	V	A	P	H	D	C	.	T	G	P	V	V	L	T	A	S	T	H	L	S	L	N	A	P	N	A	L	V	Q	E	S	V	R	A	F	Y	D	G	W	Y	R	D	L	V	T	A	L	P	T	V	K	D	G	H	I
Template Known Secondary structure				T	T	T	T	T															T	T								S	.	S																T	T	B											T	T	T	T	T	T	T	B	S							T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	P	D	G	P	G	L	G	L	E	L	X	P	D	I	R	E	R	L
Template Known Secondary structure					S	S	S	B	T	S			B		T	T					S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions