Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 49 Aligned Residues 348 % Identity 22% Template c2pmqA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from roseovarius sp. htcc2601 Resolution 1.72 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																						.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																																						.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	.	.	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	.	.	.	.	.	.	.	.	.	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L
Query Conservation															.	.																																						.	.	.	.	.	.	.	.	.
Alig confidence															.	.																	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		K	I	A	E	I	Q	L	F	Q	H	D	L	P	V	V	N	G	P	Y	R	I	A	S	G	D	V	W	S	L	T	T	.	T	I	V	K	I	I	A	E	D	G	T	I	G	W	G	E	T	C	P	V	G	P	T	Y	A	E	A	H	A	G	G	A	L	A	A	L	E	V	L	A	S	G	L	A	G	A	E	A
Template Known Secondary structure																T	T			B			T	T			B	S					.								T	T	S										S	S	S	S	S	S	S																T	T	T	T			S
Template Predicted Secondary structure																																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template Sequence		L	P	L	P	L	H	T	R	X	D	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	G	H	N	Y	A	K	S	A	L	D	I	A	V	H	D	L	W	G	K	R	L	G	V	P	V	H	E	L	L	G	.	G	A	L	T	D	S	V	S	S	Y	Y	S	L	G	.	.	.	.	.
Template Known Secondary structure		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																						T		B					T	T	.			S		S										.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.																	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		K	A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	.	P	Q	A	R	I	T	L	D
Query Conservation																																																																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	X	E	P	D	E	A	A	R	Q	A	L	E	K	Q	R	E	.	G	Y	S	R	L	Q	V	K	L	G	A	R	P	I	E	I	D	I	E	A	I	R	K	V	W	E	A	V	R	G	T	G	I	A	L	A	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	.	T		S								S	S																	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																										139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.
Query Conservation																																																																																	.
Alig confidence																																.	.	.	.	.	.																																												.
Template Conservation																																.	.	.	.	.	.
Template Sequence		G	N	R	G	W	T	T	R	D	A	L	R	F	S	R	E	C	P	D	I	P	F	V	X	E	Q	P	C	N	S	.	.	.	.	.	.	F	E	D	L	E	A	I	R	P	L	C	H	H	A	L	Y	X	D	E	D	G	T	S	L	N	T	V	I	T	A	A	A	T	S	L	V	D	G	F	G	X	K	V	S
Template Known Secondary structure			T	T															T	T	S						S		S	S	S	.	.	.	.	.	.								G	G	G			S					S	T	T			S										T	T			S					B
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	G	G	L	Q	H	X	R	A	F	R	D	F	C	A	A	R	N	L	P	H	T	C	D	D	A	W	G	G	D	I	V	S	A	A	C	T	H	I	A	S	T	V	L	P	R	L	X	E	G	A	W	L	A	Q	P	Y	V	A	E	H	Y	D	A	E	N	G	V	R	I	E	G	G	R	I	R	V	P	Q
Template Known Secondary structure				T	S															T						B		S	S		S												T	T	S		G	G	G							S	G	G	G		S			S	S	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	G	L	G	L	T	I	D	P	E	R	F	G	P	P
Template Known Secondary structure		S	S	B	T	S					T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions