Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 61 Aligned Residues 347 % Identity 22% Template c2p88E_ PDB info PDB header:lyase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579 Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.										.
Query SS confidence																																																				.	.	.	.	.	.	.	.										.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	.	.	.	.	.	.	.	.	E	K	I	R	K	T	L	E	D	.	A	I	P	L	V	V	G	K	T	L	G	E
Query Conservation																																																				.	.	.	.	.	.	.	.										.
Alig confidence																																																				.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		K	I	T	A	I	H	L	Y	A	I	R	L	P	L	R	N	P	F	V	I	S	Y	G	S	Y	S	D	M	P	S	I	I	V	K	M	E	T	D	E	G	I	I	G	Y	G	E	G	V	A	D	D	H	V	T	G	E	S	W	E	S	T	F	H	T	L	K	H	T	L	T	P	A	L	I	G	Q	N	P	M	N
Template Known Secondary structure																						T	T																T	T	S															S													T						T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.
Template Sequence		I	E	K	I	H	D	M	M	D	N	T	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	T	A	K	A	A	I	D	I	A	C	F	D	I	M	G	K	K	L	N	Q	P	V	Y	Q	L	I	G	.	G	R	Y	H	E	E	F	P	V	T	H	V	L	S	.	.	.	.	.	.	.
Template Known Secondary structure														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T	S	B	G	G	G	G	T	T	.					S										.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.																.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	D	P	E	N	M	A	E	E	A	A	S	M	I	Q	K	.	G	Y	Q	S	F	K	M	K	V	G	T	.	N	V	K	E	D	V	K	R	I	E	A	V	R	E	R	V	G	N	D	I	A	I	R	V	D	V	N	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T	.	T										S	.																T	T	T	S	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.
Template SS confidence
																								139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		239	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.
Predicted Secondary structure				.															.																																																													.
Query SS confidence				.															.																																																													.
Query Sequence		A	W	.	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.	H
Query Conservation				.															.																																																													.
Alig confidence				.															.														.	.	.	.																																												.
Template Conservation																																	.	.	.	.
Template Sequence		G	W	K	N	S	A	N	T	L	T	A	L	R	S	L	G	H	L	N	I	D	W	I	E	Q	P	V	I	A	D	D	.	.	.	.	I	D	A	M	A	H	I	R	S	K	T	D	L	P	L	M	I	D	E	G	L	K	S	S	R	E	M	R	Q	I	I	K	L	E	A	A	D	K	V	N	I	K	L	M	K
Template Known Secondary structure		T	T	B	S										T	S	T	T	T	T		S						B		T	T		.	.	.	.										T			S					S	T	T			S											T			S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K
Query Conservation
Alig confidence																																																		.														.	.	.
Template Conservation																																																		.														.	.	.
Template Sequence		C	G	G	I	Y	P	A	V	K	L	A	H	Q	A	E	M	A	G	I	E	C	Q	V	G	S	M	V	E	S	S	V	A	S	S	A	G	F	H	V	A	F	S	K	K	I	I	T	S	.	V	E	L	T	G	P	L	K	F	T	K	D	I	.	.	.	G	N	L	H	Y	D	V	P	F	I	R	L	N	E	K
Template Known Secondary structure			T	S														T	T								S	S																	T	T				.					G	G	G	T	B	S			S	.	.	.	S						T	T
Template Predicted Secondary structure																																																		.														.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	L	G	I	E	I	N	E	D	T	L	Q	E	L
Template Known Secondary structure		S	B	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions