Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 28 Aligned Residues 364 % Identity 26% Template c2oqhD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative isomerase; PDBTitle: crystal structure of an isomerase from streptomyces coelicolor a3(2) Resolution 1.98 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V	L	T	L	V	R
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		K	I	T	D	V	D	V	W	V	V	N	L	P	L	V	N	P	F	E	T	K	T	G	E	T	R	.	.	.	.	T	V	V	R	V	R	T	D	S	G	V	E	G	W	G	E	T	X	W	G	A	P	V	A	A	I	V	R	R	X	A	P	D	L	I	G	T	S	P	F	A	L	E	A	F	H	R	K	Q	H
Template Known Secondary structure															B													.	.	.	.								T	T	S										S															T	T	S		T	T									T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P	Y	Q	S	Q	P
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																.																										.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																																.																										.	.	.	.	.
Template Sequence		X	V	P	F	F	Y	G	.	.	.	.	.	.	.	.	.	.	.	Y	L	G	Y	A	A	I	A	A	V	D	V	A	C	W	D	A	X	G	K	A	T	G	Q	S	V	T	D	L	L	G	.	G	A	V	R	D	E	V	P	I	T	A	L	I	T	R	A	D	A	P	G	A	T	P	A	D	.	.	.	.	.
Template Known Secondary structure		T							.	.	.	.	.	.	.	.	.	.	.																							T		B	T	T	G	G	G	T	.			S		S										G	G	G	S	T	T			G	G	G	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																.																										.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	P	Q	A	R	I	T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	K	A	X	A	E	H	A	V	R	V	V	E	E	G	.	G	F	D	A	V	K	L	K	G	T	T	.	D	C	A	G	D	V	A	I	L	R	A	V	R	E	A	L	P	G	V	N	L	R	V	D	P	N	A	A	W	S	V	P	D	S	V	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.			S								S	.																	T	T	S							T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.
Template SS confidence
																147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		249	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure								.																																																															.
Query SS confidence								.																																																															.
Query Sequence		G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	H	F	.	W	T	M	Q	G	S	V	R	V	A
Query Conservation								.																																																															.
Alig confidence								.											.	.		.	.	.	.																																														.
Template Conservation																			.	.		.	.	.	.
Template Sequence		G	I	A	L	E	E	L	D	L	E	Y	L	E	D	P	C	V	.	.	G	.	.	.	.	I	E	G	X	A	Q	V	K	A	K	V	R	I	P	L	C	T	N	X	C	V	V	R	F	E	D	F	A	P	A	X	R	L	N	A	V	D	V	I	H	G	D	V	Y	K	W	G	G	I	A	A	T	K	A	L	A
Template Known Secondary structure						G	G	G			S						S	S	.	.		.	.	.	.													S					S	S	S			S										T	T			S										T	S
Template Predicted Secondary structure																			.	.		.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q
Query Conservation
Alig confidence																																												.	.	.
Template Conservation																																												.	.	.
Template Sequence		A	H	C	E	T	F	G	L	G	X	N	L	H	S	G	G	E	L	G	I	A	T	A	A	H	L	A	V	V	S	S	T	P	V	L	S	R	A	I	D	S	X	.	.	.	Y	Y	L	H	A	D	D	I	I	E	P	L	H	L	E	N	G	R	L	R	V	P	S	G	P	G	L	G	V	S	V	D	E	D	K
Template Known Secondary structure							T	T								S	S															T		T	T			S						.	.	.	G	G	G	B		S		S	B							T	T							S	S	B	T	S			B
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		407	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	K	A	H	E	L	Y	Q	K	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	H	Y	A	G	V	N	E	R	D	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions