Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 9 Aligned Residues 361 % Identity 21% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	.	.	.	P	G	G	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V	L	T
Query Conservation																																																	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	V	S	V	D	T	L	C	C	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	G	W	R	N	Y	H	F	V	K	L	T	T	D	E	G	I	V	G	W	S	E	F	D	E	G	F	G	S	P	G	V	T	A	V	I	E	Q	L	G	K	R	L	V	G	A	S	V	M	E	H	E	R	F	F	A
Template Known Secondary structure		B										.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S										T	T										S	T	T	T		T	T													T	T	S	B	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.														.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P	Y	Q
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	Y	C	L	T	R	P	A	T	.	.	.	.	.	.	.	.	.	.	G	G	V	V	S	E	G	I	G	A	I	E	N	A	L	L	D	A	K	A	K	T	L	N	V	P	C	Y	E	L	L	G	.	G	K	L	R	D	R	V	P	V	Y	W	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	G	G	G		.	.	.	.	.	.	.	.	.	.	S																						T	T	S	B	G	G	G	G	T	T	.			S		S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.											.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																										.	.	.	.	.	.	.	220
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	E	E	A	E	S	I
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																	.
Template Sequence		.	C	P	T	W	R	I	N	H	P	K	F	F	G	P	P	V	T	D	L	D	G	V	K	R	T	A	E	E	A	R	E	R	.	Q	F	R	A	I	K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L
Template Known Secondary structure		.	T	T							T	T	T	S	S	S				S														T	.	T												S	S	S	S					B	G	G	G	T	B	S			T	T
Template Predicted Secondary structure		.																																	.
Template SS confidence
			124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		221	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																												.
Query SS confidence									.																												.
Query Sequence		V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M
Query Conservation									.																												.
Alig confidence									.																												.												.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		E	A	L	R	D	G	A	G	P	D	V	E	I	L	L	D	L	N	F	N	A	K	P	E	G	Y	L	K	I	L	R	E	L	A	D	F	D	L	F	W	V	E	I	D	S	Y	S	.	.	.	.	.	.	P	Q	G	L	A	Y	V	R	N	H	S	P	H	P	I	S	S	C	E	T	L	F	G	I	R	E	F
Template Known Secondary structure										S	S	S							T	T		S												T	T	T	S			S							S		.	.	.	.	.	.										T		S	S						T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L
Query Conservation
Alig confidence																																													.																						.
Template Conservation																																													.																						.
Template Sequence		K	P	F	F	D	A	N	A	V	D	V	A	I	V	D	T	I	W	N	G	V	W	Q	S	M	K	I	A	A	F	A	D	A	H	D	I	N	V	A	P	H	N	F	.	Y	G	H	L	C	T	M	I	N	A	N	F	A	A	A	V	P	N	L	R	I	.	M	E	T	D	I	D	R	L	A	W	E	D	E	L
Template Known Secondary structure							T	T			S																								T	T									.	S																S	S	B			.						S			T	T	T	G	G	G
Template Predicted Secondary structure																																													.																						.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A	H	E	L	Y	Q	K	H	G	L
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		F	T	H	A	P	E	Y	Q	N	G	E	L	I	I	P	D	R	P	G	W	G	T	D	P	V	E	E	A	I	L	A	H	.	.	P	P	K	V	G	G	L
Template Known Secondary structure		B	S							T	T							S	S	B	S	S			B								S	.	.						T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.