Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 67 Aligned Residues 342 % Identity 22% Template c2fkpC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:n-acylamino acid racemase; PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.								.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	.	.	.	.	.	.	.	.	.	.	I	R	K	T	L	E	D	.	A	I	P	L	V	V	G	K	T	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.								.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.								.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	E	A	A	E	I	V	V	A	R	L	P	L	K	.	.	.	.	.	.	.	.	.	.	.	T	H	K	V	V	P	L	L	I	L	H	G	E	G	V	Q	G	V	A	E	G	T	M	E	A	R	P	M	Y	R	E	E	T	I	A	G	A	L	D	L	L	R	G	T	F	L	P	A	I	L	G	Q	T	F
Template Known Secondary structure															B		.	.	.	.	.	.	.	.	.	.	.													T	T										B	S	S	S	S	S	S	S		B											T						T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.												.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template Sequence		A	N	P	E	A	V	S	D	A	L	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	G	N	R	M	A	R	A	M	V	E	M	A	A	W	D	L	W	A	R	T	L	G	V	P	L	C	T	L	L	G	.	G	H	K	E	Q	V	E	V	G	V	S	L	G	I	.	.	.	.	.
Template Known Secondary structure		S	S								T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S																					T		B						T	.				S				B							.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.																	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	P	Q	A	R	I	T	L	D	P	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	D	E	Q	A	T	V	D	L	V	R	R	H	V	E	Q	.	G	Y	R	R	I	K	L	K	I	K	P	.	.	.	G	W	D	V	Q	P	V	R	A	T	R	E	A	F	P	D	I	R	L	T	V	D	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													T	T	.	T		S							B	T	.	.	.	T	B	S												S	S	S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Template SS confidence
																										146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	H	F
Query Conservation																			.
Alig confidence													.						.														.	.	.	.
Template Conservation													.																				.	.	.	.
Template Sequence		S	A	Y	T	L	A	D	A	G	R	L	.	R	Q	L	D	E	Y	D	L	T	Y	I	E	Q	P	L	A	W	D	D	.	.	.	.	L	V	D	H	A	E	L	A	R	R	I	R	T	P	L	C	L	D	E	S	V	A	S	A	S	D	A	R	K	A	L	A	L	G	A	G	G	V	I	N	L	K	V	A	R
Template Known Secondary structure		T				G	G	G					.		G	G	G	G	G			S						S		T	T		.	.	.	.	S											S	S					S	T	T			S											T	S		S						T	T	T
Template Predicted Secondary structure													.																				.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
			317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E	K
Query Conservation		.
Alig confidence		.																																																.
Template Conservation																																																		.
Template Sequence		V	G	G	H	A	E	S	R	R	V	H	D	V	A	Q	S	F	G	A	P	V	W	C	G	G	M	L	E	S	G	I	G	R	A	H	N	I	H	L	S	C	L	S	N	F	R	L	P	.	G	D	T	S	S	A	S	R	Y	W	E	R	D	L	I	Q	E	P	L	E	A	V	D	G	L	M	P	V	P	Q	G
Template Known Secondary structure		T	T	S														T	T																						T	T	S	T	T	B		S		.	B	S				G	G	G	T	B	S	S		S	B	S	S					B	T	T							S
Template Predicted Secondary structure																																																		.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A	H	E	L	Y	Q	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	T	G	V	T	L	D	R	E	F	L	A	T	V	T	E	A	Q	E	E	H
Template Known Secondary structure		S	B	T	S			B
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions