Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 77 Aligned Residues 357 % Identity 16% Template c2dw7G_ PDB info PDB header:lyase Chain: G: PDB Molecule:bll6730 protein; PDBTitle: crystal structure of d-tartrate dehydratase from2 bradyrhizobium japonicum complexed with mg++ and meso-3 tartrate Resolution 2.50 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	.	.	.	.	.	.	.	P	G	G	E	K	I	R	K	T	L	E	D	A	I	P	L	V	V	G	K	T	L	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		V	R	I	V	D	V	R	E	I	T	K	P	I	S	S	P	I	R	N	A	Y	I	D	F	T	K	M	T	T	S	L	V	A	V	V	T	D	V	V	R	E	G	K	R	V	V	G	Y	G	F	N	S	N	G	R	Y	G	Q	G	G	L	I	R	E	R	F	A	S	R	I	L	E	A	D	P	K	K	L	L	N
Template Known Secondary structure																	S		B		S	S		B		T	T															T	T											T	T	S										T							T	S		G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
							78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																																	.	.	.	.
Query SS confidence		.	.	.	.	.																																																																	.	.	.	.
Query Sequence		.	.	.	.	.	G	E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	.	.	.	.	R	S	E	V	E	M	L
Query Conservation		.	.	.	.	.																																																																	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																																								.				.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		E	A	G	D	N	L	D	P	D	K	V	W	A	A	M	M	.	.	.	.	.	.	.	.	.	.	I	N	E	K	P	G	G	H	G	E	R	S	V	A	V	G	T	I	D	M	A	V	W	D	A	V	A	K	I	A	G	K	P	L	F	R	L	L	A	.	E	R	H	G	V	K	A	N	P	R	V	F	V	Y
Template Known Secondary structure		S	S	S	S	S	B										T	.	.	.	.	.	.	.	.	.	.	T	T			S	S			S	S																				T	T	S	B							.				T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.
Query Conservation																																																																																	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																													.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	Y	P	G	K	G	L	S	M	L	R	G	E	M	R	G	Y	L	D	R	.	G	Y	N	V	V	K	M	K	I	G	G	A	P	I	E	E	D	R	M	R	I	E	A	V	L	E	E	I	G
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		T	T																T	.	T		S							S	S	S																	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		152	.	.	.																										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		P	Q	A	R	I	T	L	D	P	N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S
Query Conservation																													.
Alig confidence																													.														.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		K	D	A	Q	L	A	V	D	A	N	G	R	F	N	L	E	T	G	I	A	Y	A	K	M	L	R	D	Y	P	L	F	W	Y	E	E	V	G	D	P	L	D	.	.	.	.	Y	A	L	Q	A	A	L	A	E	F	Y	P	G	P	M	A	T	G	E	N	L	F	S	H	Q	D	A	R	N	L	L	R	Y	G	G
Template Known Secondary structure		T	S								T	T															T	T	S			S						S		T	T		.	.	.	.								T	T	T			S						T	T			S											S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		307					.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure			.	.	.	.								.
Query SS confidence			.	.	.	.								.
Query Sequence		V	.	.	.	.	D	I	P	L	A	D	P	.	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E
Query Conservation			.	.	.	.								.
Alig confidence			.	.	.	.								.																												.	.	.																				.	.	.
Template Conservation																																										.	.	.																				.	.	.
Template Sequence		M	R	P	D	R	D	W	L	Q	F	D	C	A	L	S	Y	G	L	C	E	Y	Q	R	T	L	E	V	L	K	T	H	G	W	S	P	S	R	C	I	P	.	.	.	H	G	G	H	Q	M	S	L	N	I	A	A	G	L	G	L	G	G	N	.	.	.	E	S	Y	P	D	L	F	Q	P	Y	G	G	F	P	D
Template Known Secondary structure				T	T	T							G	G	G	T	T															T	T			G	G	G	B			.	.	.	S	S													T		S			.	.	.				S	S	S	S	T	T	S	S	S			T
Template Predicted Secondary structure																																										.	.	.																				.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	E	I	K	G	G	L	V	Q	V	P	E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A	H	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	R	V	E	N	G	H	I	T	M	P	D	L	P	G	I	G	F	E	G	K	S	D	L	Y	K	E	M	K	A	L
Template Known Secondary structure		T					S	S								S	B	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low