 |
Job Description | P0AES2 | Confidence | 58.43% | Date | Thu Jan 5 11:24:05 GMT 2012 |
Rank | 259 | Aligned Residues | 75 |
% Identity | 24% | Template | c1ydoC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:hmg-coa lyase; |
PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181.
|
Resolution | 2.71 Å |
|
 |
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | D | A | V | V | R | L | A | E | A | A | Y | E | K | Y | G | F | N | D | F | K | L | K | . |
. |
G | G | V | L | A | G | E | E | E | A | E | S | I | V | A | L | A | Q | R | F | P | Q | A | R | I | T | L | D | P | N | G | A | W | S | L | N | E | A | I | K | I | G | K | Y | L | K | G | S | L | A | Y | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
| . | . |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |
|   | . |
|   |   |
|
|
|   |   |
|
|
Template Sequence |   |
P | I | E | Q | V | I | R | L | S | E | A | L | F | E | F | . |
G | I | S | E | L | S | L | G | D | T | I | G | A | A | N | P | A | Q | V | E | T | V | L | E | A | L | L | A | R | F | P | A | N | Q | I | A | L | H | F | H | D | T | R | G | T | A | L | A | N | X | V | T | . |
A | L | Q | X | G | I | T | V | F | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
| S |
|  |  |  |  |
| S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | G | G |  |  |  |  |
| B | G | G | G | S |
|  |  |  |  |  |  |  | . |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
. | . | . | . | . | . | . | . | 230 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|