Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 24 Aligned Residues 363 % Identity 17% Template c1rvkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																								.	.	.	.																																						.
Query SS confidence																								.	.	.	.																																						.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	.	.	.	.	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	I	R	K	T	L	E	D	.	A	I	P	L	V	V	G	K	T	L	G	E	Y	K	N	V
Query Conservation																								.	.	.	.																																						.
Alig confidence																								.	.	.	.																																						.
Template Conservation
Template Sequence		I	I	T	D	V	E	V	R	V	F	R	T	T	T	R	R	H	S	D	S	A	G	H	A	H	P	G	P	A	H	Q	V	E	Q	A	X	L	T	V	R	T	E	D	G	Q	E	G	H	S	F	T	A	P	E	I	V	R	P	H	V	I	E	K	F	V	K	K	V	L	I	G	E	D	H	R	D	R	E	R	L
Template Known Secondary structure		B																			T	T	S																				T	T	S									G	G	G	G								T						T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R	K	A	T	P	L	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																																.		.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																.		.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	Q	D	L	A	H	W	Q	R	G	S	A	A	.	.	.	.	.	.	.	.	.	.	Q	L	T	D	R	T	L	A	V	V	D	C	A	L	W	D	L	A	G	R	S	L	G	Q	P	V	Y	K	L	I	G	.	G	.	Y	R	D	K	V	L	A	Y	G	S	I	X	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	T	T	.	.	.	.	.	.	.	.	.	.		S																					T		B							.		.	S		S										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																.		.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.		.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.																			.
Query SS confidence																																																.	.	.	.	.	.																			.
Query Sequence		Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	.	.	.	.	.	.	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P
Query Conservation																																																.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.											.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	C	G	D	E	L	E	G	G	L	A	T	P	E	D	Y	G	R	F	A	E	T	L	V	K	R	.	G	Y	K	G	I	K	L	H	T	W	X	P	P	V	S	W	A	P	D	V	K	X	D	L	K	A	C	A	A	V	R	E	A	V	G	P	D	I	R	L	X	I	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						T	T	T	T	S	S															.	T		S									T	T	S	T	T																				T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
												139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																				.																																											.
Query SS confidence																				.																																											.
Query Sequence		N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	.	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P
Query Conservation																				.																																											.
Alig confidence																				.														.	.	.	.																										.
Template Conservation																																		.	.	.	.
Template Sequence		F	H	W	Y	S	R	T	D	A	L	A	L	G	R	G	L	E	K	L	G	F	D	W	I	E	E	P	X	D	E	Q	S	.	.	.	.	L	S	S	Y	K	W	L	S	D	N	L	D	I	P	V	V	G	P	E	S	A	A	G	K	H	W	H	R	A	E	W	I	K	A	G	A	C	D	I	L	R	T	G	V
Template Known Secondary structure			T	T															T	T	T		S						S		T	T		.	.	.	.												S	S						S	S		S	S											T	T			S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
			315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P
Query Conservation		.
Alig confidence		.																																																		.
Template Conservation																																																				.
Template Sequence		N	D	V	G	G	I	T	P	A	L	K	T	X	H	L	A	E	A	F	G	X	E	C	E	V	H	G	N	T	A	X	N	L	H	V	V	A	A	T	K	N	C	R	W	Y	E	R	G	L	L	.	H	P	F	L	E	Y	D	D	G	H	D	Y	L	K	S	L	S	D	P	X	D	R	D	G	F	V	H	V	P
Template Known Secondary structure					T	S														T	T									S											S	S										.		T	T	S		G	G	G			T	T	B	S	S		S	S		B		T	T	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	P	G	L	G	E	D	I	D	F	T	F	I	D	N	N
Template Known Secondary structure		S		S	B	T				B								T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions