Job Description P0AES2 Confidence 100.00% Date Thu Jan 5 11:24:05 GMT 2012 Rank 22 Aligned Residues 353 % Identity 21% Template c1nu5A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: crystal structure of pseudomonas sp. p51 chloromuconate lactonizing2 enzyme Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.								.
Query Sequence		V	V	T	E	M	Q	V	I	P	V	A	G	H	D	S	M	L	M	N	L	S	G	A	H	A	P	F	F	T	R	N	I	V	I	I	K	D	N	S	G	H	T	G	V	G	E	I	P	G	G	E	K	.	.	.	.	.	.	.	.	.	.	I	R	K	T	L	E	D	.	A	I	P	L	V	V	G	K	T	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.								.
Alig confidence																																								.														.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																								.
Template Sequence		K	I	E	A	I	S	T	T	I	V	D	V	P	T	R	R	P	L	Q	M	S	F	T	T	V	H	K	Q	S	Y	V	I	V	Q	V	K	A	G	.	G	L	V	G	I	G	E	G	G	S	V	G	G	P	T	W	G	S	E	S	A	E	T	I	K	V	I	I	D	N	Y	L	A	P	L	L	V	G	K	D	A
Template Known Secondary structure		B																				T	T																T	.	T										S	T	T	T	T	T	S	S													T						T	T	S	B	T
Template Predicted Secondary structure																																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	K	N	V	L	T	L	V	R	N	T	F	A	D	R	D	A	G	G	R	G	L	Q	T	F	D	L	R	T	T	I	H	V	V	T	G	I	E	A	A	M	L	D	L	L	G	Q	H	L	G	V	N	V	A	S	L	L	G	D	G	Q	Q	R	S	E	V	E	M	L	G	Y	L	F	F	V	G	N	R
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.
Template Sequence		S	N	L	S	Q	A	R	V	L	M	D	R	A	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	S	A	K	A	A	I	D	I	A	L	H	D	L	K	A	R	A	L	N	L	S	I	A	D	L	I	G	.	G	T	M	R	T	S	I	P	I	A	W	T	L	.	.	.	.	.	.
Template Known Secondary structure		T														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																				T	T		B						T	.			S		S				B					.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	A	T	P	L	P	Y	Q	S	Q	P	D	D	S	C	D	W	Y	R	L	R	H	E	E	A	M	T	P	D	A	V	V	R	L	A	E	A	A	Y	E	K	Y	G	F	N	D	F	K	L	K	G	G	V	L	A	G	E	E	E	A	E	S	I	V	A	L	A	Q	R	F	.	P	Q	A	R	I	T	L	D	P
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	D	T	A	R	D	I	D	S	A	L	E	M	I	E	T	R	.	R	H	N	R	F	K	V	K	L	G	A	R	T	P	A	Q	D	L	E	H	I	R	S	I	V	K	A	V	G	D	R	A	S	V	R	V	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S															T	T	.	S		S							S	S	S																	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
																								139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																				.																																																													.
Query SS confidence																				.																																																													.
Query Sequence		N	G	A	W	S	L	N	E	A	I	K	I	G	K	Y	L	K	G	.	S	L	A	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	T	A	T	N	M	I	A	T	D	W	R	Q	M	G	H	T	L	S	L	Q	S	V	D	I	P	L	A	D	P	.
Query Conservation																				.																																																													.
Alig confidence																				.														.	.	.	.																																												.
Template Conservation																																		.	.	.	.
Template Sequence		N	Q	G	W	D	E	Q	T	A	S	I	W	I	P	R	L	E	E	A	G	V	E	L	V	E	Q	P	V	P	R	A	N	.	.	.	.	F	G	A	L	R	R	L	T	E	Q	N	G	V	A	I	L	A	D	E	S	L	S	S	L	S	S	A	F	E	L	A	R	D	H	A	V	D	A	F	S	L	K	L	C
Template Known Secondary structure		T	T																		T								S		T	T		.	.	.	.												S	S					S	T	T			S										T	T			S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	W	T	M	Q	G	S	V	R	V	A	Q	M	C	H	E	F	G	L	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	A	A	A	A	P	G	K	I	T	A	I	D	T	H	W	I	W	Q	E	G	N	Q	R	L	T	K	E	P	F	E	I	K	G	G	L	V	Q	V	P	E
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		N	M	G	G	I	A	N	T	L	K	V	A	A	V	A	E	A	A	G	I	S	S	Y	G	G	T	M	L	D	S	T	V	G	T	A	A	A	L	H	V	Y	A	T	L	P	S	L	P	Y	G	C	E	L	I	G	.	P	W	V	L	G	D	R	L	T	Q	Q	D	L	E	I	K	D	F	E	V	H	L	P	L
Template Known Secondary structure				T	S															T								S	S														T	T	S	S			T	T		B					.				B	S	S		S	B	S	S						T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	L	G	V	E	I	D	M	D	Q	V	M	K	A	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	G	L	G	V	D	L	D	H	D	K	V	R	H	Y	T	R
Template Known Secondary structure		S	S	B	T	S			B									B
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions