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Job DescriptionP0AES2
Confidence100.00%DateThu Jan 5 11:24:05 GMT 2012
Rank1Aligned Residues442
% Identity100%Templatec1ec8B_
PDB info PDB header:lyaseChain: B: PDB Molecule:glucarate dehydratase; PDBTitle: e. coli glucarate dehydratase bound to product 2,3-2 dihydroxy-5-oxo-hexanedioate
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  FTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVL
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Template Sequence  FTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVL
Template Known Secondary structure 



B


TT

STTS


TT
BGGG
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  TLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPY
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Template Sequence  TLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPY
Template Known Secondary structure  TGGGGTT
S
SSSS


STT
BGGGGSTTS


SB



GGGS
S

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  QSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNE
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Template Sequence  QSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNE
Template Known Secondary structure 


TT
SSTTS
B
S

S

SSS

TTS

TT
B
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  AIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVR
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Template Sequence  AIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVR
Template Known Secondary structure  TTTT
SS
B

BTTB



SSSSSST

SB


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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  VAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDM
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Template Sequence  VAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDM
Template Known Secondary structure  T


B



S

T

S



B


TTT

SBSS



BTT


SSBT


B
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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   405....410.........420.........430.........440......
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Query Sequence  DQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
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Template Sequence  DQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
Template Known Secondary structure  TT

S

STTSTT



TTS
TT

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   405....410.........420.........430.........440......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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