Return to main results Retrieve Phyre Job Id

Job DescriptionP71311
Confidence100.00%DateThu Jan 5 12:12:46 GMT 2012
Rank6Aligned Residues168
% Identity27%Templated1q74a_
SCOP infoLmbE-like LmbE-like LmbE-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.. .......70.........
Predicted Secondary structure 



















...............



Query SS confidence 















































. . . . . . . . . . . . . . .
















Query Sequence  KRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGI. . . . . . . . . . . . . . . IDRHEESRNALKILGCH
Query Conservation     




 





    




 
   
  
 

 

 
       ...............  
  
   
   

  
Alig confidence 















































...............
















Template Conservation     


 
 





 
  

 

     
  
 

  
 

 
                 
   
  
   
   

  
Template Sequence  ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHADQLGGYRIGELTAALRALGVS
Template Known Secondary structure 


SSTTTT
S


TT


SSSTTGGGSTTTT

TT

Template Predicted Secondary structure 

































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   80........ .90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 




............




















..
Query SS confidence 








. . . . . . . . . . . .
























































. .
Query Sequence  QTIHLNFAD. . . . . . . . . . . . TRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTI. .
Query Conservation      
   
............             
   
    
  
    
      
 
 

  
  
   
    ..
Alig confidence 








............

























...



























..
Template Conservation      
   
   
                     
   
    



...

  
 
  

 

         
   
  
Template Sequence  APIYLGGAGRWRDSGMARSQRRFVDADPRQTVGALVAIIRELRPHVV. . . VTYDPNGGYGHPDHVHTHTVTTAAVAAAGV
Template Known Secondary structure 

TTSTTSSB






S
BGGGS


S...
TTTTT


Template Predicted Secondary structure 
























...









Template SS confidence 















































































   83......90.........100.........110.........120......... 130.........140.........150.........
 
   146...150..... ....160.........170.........180.....
Predicted Secondary structure  ........




.............................












Query SS confidence  . . . . . . . .









. . . . . . . . . . . . . . . . . . . . . . . . . . . . .





























Query Sequence  . . . . . . . . PQILGYETPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . TWLSFMPQVFESVKEEYFTVKLAALKKHKS
Query Conservation  ........      
   .............................      
   



      
  

  
 
Alig confidence  ........









.............................





























Template Conservation      
                                                    
         
  

  
 
Template Sequence  HPGDPWTVPKFYWTVLGLSALISGARALVPDDLRPEWVLPRADEIAFGYSDDGIDAVVEADEQARAAKVAALAAHAT
Template Known Secondary structure 

S




S
B

GGGS
TT
B


GGGT


B
GGG




TT
Template Predicted Secondary structure 









































Template SS confidence 












































































   170.........180.........190.........200.........210.........220.........230.........240......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions