Job Description P71311 Confidence 30.88% Date Thu Jan 5 12:12:46 GMT 2012 Rank 38 Aligned Residues 85 % Identity 19% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		I	G	A	H	P	D	D	I	E	L	G	C	G	A	S	L	A	R	L	A	Q	K	.	G	I	Y	I	A	A	V	V	M	T	T	G	N	S	G	T	D	G	I	I	D	R	H	E	E	S	R	N	A	L	K	I	L	G	C	H	Q	T	I	H	L	N	F	A	D	T	R	A	H	L	Q	L	N	D	M	I	S
Query Conservation																								.
Alig confidence												.	.											.																																									.
Template Conservation												.	.																																																				.
Template Sequence		V	N	L	G	V	S	A	E	E	R	.	.	G	K	V	L	A	E	R	S	K	E	X	G	A	K	A	F	I	H	Y	A	S	T	D	D	L	K	D	V	N	I	A	K	R	L	E	X	I	K	E	T	C	K	N	I	G	L	P	F	V	Q	V	.	N	T	P	N	I	N	T	E	E	D	K	N	K	V	K	Q
Template Known Secondary structure												.	.											T	T		S								T	T	G	G	G	S																	T	T							.						S	S	T
Template Predicted Secondary structure												.	.																																																				.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		101	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	D	I	I	K	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	N	E	D	I	E	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions