|   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | V | T | V | I | I | K | P | F | K | . |
. |
. |
. |
. |
. |
. |
L | E | D | V | R | E | A | L | S | S | I | G | I | Q | G | L | T | V | T | E | . |
V | K | G | F | G | R | Q | K | G | H | A | E | L | Y | R | G | A | E | Y | S | V | N | F | L | P | K | V | K | I | D | V | A | I | A | D | D | Q | L | D | E | V |
Query Conservation |   |
|   |
|   |
|
|
|
|   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|
|   |   | . |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |
|
|   |
|
|   |   |
|
|
|   |   |   |
Template Sequence |   |
K | L | L | K | I | Y | L | G | E | K | D | K | H | S | G | K | P | L | F | E | Y | L | V | K | R | A | Y | E | L | G | X | K | G | V | T | V | Y | R | G | I | X | G | F | G | H | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | P | I | V | L | E | I | V | D | E | E | E | R | I | N | L | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|  |  |  |  |
| S |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | I | V | S | K | A | A | Y | T | G | K | I | G | D | G | K | I | F | V | A | E | L | Q |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . |
|
|
|
|   |
|   |
|   |
Template Sequence |   |
L | K | E | I | D | N | I | D | F | D | . |
. |
. |
. |
. |
G | L | V | F | T | A | D | V | N |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|
|
|
| . | . | . | . | . | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 90 | . | . | . | . | . | . | . |
  |