 |
Job Description | P0AC55 | Confidence | 7.63% | Date | Thu Jan 5 11:17:13 GMT 2012 |
Rank | 84 | Aligned Residues | 86 |
% Identity | 17% | Template | c3cprB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:dihydrodipicolinate synthetase; |
PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution
|
Resolution | 2.20 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | P | F | K | L | E | D | V | R | E | A | L | S | S | I | G | I | Q | G | L | T | V | T | E | V | K | G | F | G | R | Q | K | G | H | A | E | L | Y | R | G | A | E | Y | S | V | N | F | L | P | . |
K | V | K | I | D | V | A | I | A | D | D | Q | L | D | E | V | I | D | I | V | S | K | A | A | Y | T | G | K | I |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|   |
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
| . | . |
Template Sequence |   |
I | D | I | A | A | G | R | E | V | A | A | Y | L | V | D | K | G | L | D | S | L | V | L | A | G | T | T | G | E | S | P | T | T | T | A | A | E | K | L | E | L | L | K | A | V | R | E | E | V | G | D | R | A | K | L | I | A | G | V | G | T | N | N | T | R | T | S | V | E | L | A | E | A | A | A | S | A | G | . |
. |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S | T | T | T | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
  |
  |   |
87 | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | G | K | I | F | V | A | E |
Query Conservation |   |
|
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|
|
Template Sequence |   |
A | D | G | L | L | V | V | T | P |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|