Job Description P0AC55 Confidence 99.98% Date Thu Jan 5 11:17:13 GMT 2012 Rank 10 Aligned Residues 99 % Identity 53% Template c2j9dG_ PDB info PDB header:membrane transport Chain: G: PDB Molecule:hypothetical nitrogen regulatory pii-like PDBTitle: structure of glnk1 with bound effectors indicates2 regulatory mechanism for ammonia uptake Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	V	T	V	I	I	K	P	F	K	L	E	D	V	R	E	A	L	S	S	I	G	I	Q	G	L	T	V	T	E	V	K	G	F	G	R	Q	K	G	H	A	E	L	Y	R	G	A	E	Y	S	V	N	F	L	P	K	V	K	I	D	V	A	I	A	D	D	Q	L	D	E	V	I	D	I	V	S	K	A
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	K	V	E	A	I	I	R	P	E	K	L	E	I	V	K	K	A	L	S	D	A	G	Y	V	G	M	T	V	S	E	V	K	G	R	G	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	I	P	K	V	K	I	E	L	V	V	K	E	E	D	V	D	N	V	I	D	I	I	C	E	N
Template Known Secondary structure											G	G	G											T	T																.	.	.	.	.	.	.	.	.	.	.	.	.															G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.														40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	T	G	K	I	G	D	G	K	I	F	V	A	E	L	Q	R	V	I	R	I	R	T	G	E	A	D	E	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	T	G	N	P	G	D	G	K	I	F	V	I	P	V	E	R	V	V	R	V	R	T	K	E	E	G	K	E	A	L
Template Known Secondary structure					S	S	T	T													B		T	T	T			B	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions