Job Description P56580 Confidence 10.93% Date Thu Jan 5 12:06:25 GMT 2012 Rank 24 Aligned Residues 79 % Identity 22% Template c2d90A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:pdz domain containing protein 1; PDBTitle: solution structure of the third pdz domain of pdz domain2 containing protein 1 Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		H	I	R	I	E	K	G	T	G	G	W	G	G	P	L	E	L	K	A	T	P	G	K	K	I	V	Y	I	T	A	G	T	R	P	A	I	V	D	K	L	A	Q	L	T	G	W	Q	.	.	.	A	I	D	G	F	K	E	G	E	P	A	E	A	E	I	G	V	A	V	I	D	C	G	G	T	L	R	C	G	I
Query Conservation																																																	.	.	.
Alig confidence														.	.																										.								.	.	.
Template Conservation														.	.																										.
Template Sequence		V	V	V	I	K	K	G	S	N	G	Y	G	.	.	F	Y	L	R	A	G	P	E	Q	K	G	Q	I	I	K	D	I	E	P	G	S	P	A	E	A	.	A	G	L	K	N	N	D	L	V	V	A	V	N	G	K	S	V	E	A	L	D	H	D	G	V	V	E	M	I	R	K	G	G	D	Q	T	T	L	L	V
Template Known Secondary structure									S	S	S	S	S	.	.							S	S	S	S	S								T	T	S	T	T	T	T	.	T	T			T	T							S	S		B		T	T	S												S	T	T
Template Predicted Secondary structure														.	.																										.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	K	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	K	E	A
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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