Return to main results Retrieve Phyre Job Id

Job DescriptionP56580
Confidence43.33%DateThu Jan 5 12:06:25 GMT 2012
Rank2Aligned Residues8
% Identity75%Templatec1z8rA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:coxsackievirus b4 polyprotein; PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.......
Predicted Secondary structure 



Query SS confidence 







Query Sequence  DCGGTLRC
Query Conservation 







Alig confidence 







Template Conservation 







Template Sequence  DAGGILRC
Template Known Secondary structure 

BS
Template Predicted Secondary structure 


Template SS confidence 







   109110......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions