Job Description P00903 Confidence 99.97% Date Thu Jan 5 10:57:07 GMT 2012 Rank 27 Aligned Residues 184 % Identity 20% Template c2w7tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative cytidine triphosphate synthase; PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.									.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Query Sequence		I	L	L	I	.	.	.	.	.	.	.	.	D	N	Y	D	S	F	T	W	N	L	Y	Q	Y	F	C	E	L	G	A	D	V	L	V	K	R	N	D	A	L	T	L	A	D	I	D	.	.	.	.	.	.	.	A	L	K	P	Q	K	I	V	I	S	P	G	P	C	T	P	D	E	A	G	I	S	L	D	V	I
Query Conservation						.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	F	V	G	K	Y	L	Q	D	A	G	D	T	Y	F	S	V	L	Q	C	F	E	H	C	Q	I	A	L	Q	V	R	L	D	I	L	Y	V	D	S	E	E	L	E	G	P	N	A	D	E	A	R	K	A	L	L	G	C	D	G	I	F	V	P	G	G	F	G	N	R	G	V	D	G	K	C	A	A	A	Q
Template Known Secondary structure													T	T	T	T															T										G	G	G	G	S	S	T	T	T									T		S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																													.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	Y	A	G	R	L	P	I	L	G	V	C	L	G	H	Q	A	M	A	Q	A	F	G	G	K	V	V	R	A	A	K	V	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	S	P	I	T	H	N	G	E	G	V	F	R	G	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		V	A	R	M	N	N	I	P	Y	F	G	V	L	.	G	M	Q	V	A	V	I	E	L	S	R	N	V	V	G	W	S	D	A	N	S	E	E	F	N	K	E	S	T	H	Q	V	V	R	I	M	D	C	D	R	N	K	M	G	A	N	M	H	L	G	A	C	D	V	Y	I	V	E	K	S	S	I	M	A	K	I
Template Known Secondary structure							T								.													T	T			T	T				T	T	T		T	T		S								G	G	G	B		S	S		B														T	T	S
Template Predicted Secondary structure															.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		119	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.
Predicted Secondary structure								.	.	.												.	.	.	.	.	.	.	.	.																													.															.
Query SS confidence								.	.	.												.	.	.	.	.	.	.	.	.																													.															.
Query Sequence		A	N	P	L	T	V	.	.	.	T	R	Y	H	S	L	V	V	E	P	D	.	.	.	.	.	.	.	.	.	S	L	P	A	C	F	D	V	T	A	W	S	E	T	R	E	I	M	G	I	R	H	R	Q	W	D	L	E	.	G	V	Q	F	H	P	E	S	I	L	S	E	Q	G	.	H	Q	L	L	A	N	F
Query Conservation								.	.	.												.	.	.	.	.	.	.	.	.																													.															.
Alig confidence								.	.	.												.	.	.	.	.	.	.	.	.																													.															.
Template Conservation
Template Sequence		Y	S	K	S	N	I	V	V	E	R	H	R	H	R	Y	E	V	N	T	A	Y	F	E	D	L	R	K	A	G	L	C	I	S	A	V	T	D	P	T	F	S	S	R	C	R	V	E	A	V	E	N	P	S	L	R	F	F	L	A	V	Q	F	H	P	E	F	I	S	T	P	M	D	P	A	P	T	Y	L	S	F
Template Known Secondary structure		T	T	T		S														G	G	G							T	T							S		T	T			T	T									T	T	S	S	S					S	S		G	G	G	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		185	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		567	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions