Job Description P00903 Confidence 99.96% Date Thu Jan 5 10:57:07 GMT 2012 Rank 32 Aligned Residues 171 % Identity 13% Template c2issF_ PDB info PDB header:lyase, transferase Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		I	L	L	I	D	N	Y	D	S	F	T	W	N	L	Y	Q	Y	F	C	E	L	G	A	D	V	L	V	K	R	N	D	A	L	T	L	A	D	I	D	A	L	K	P	Q	K	I	V	I	S	P	G	P	C	T	P	D	E	A	.	.	.	.	.	G	I	S	L	D	V	I	R	H	Y	A	G	R	L	P	I	L
Query Conservation																																																												.	.	.	.	.
Alig confidence												.																						.	.	.	.	.	.																					.	.	.	.	.
Template Conservation												.																						.	.	.	.	.	.
Template Sequence		I	G	V	L	G	V	Q	G	D	V	.	R	E	H	V	E	A	L	H	K	L	G	V	E	T	L	I	V	K	L	P	E	.	.	.	.	.	.	Q	L	D	M	V	D	G	L	I	L	P	G	G	E	S	T	T	M	I	R	I	L	K	E	M	D	M	D	E	K	L	V	E	R	I	N	N	G	L	P	V	F
Template Known Secondary structure							S	S	S			.										T	T								S	G	G	.	.	.	.	.	.	G	G	G	G		S						S	S												T	T											T	T
Template Predicted Secondary structure												.																						.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		G	V	C	L	G	H	Q	A	M	A	Q	A	F	G	G	K	V	.	.	.	.	.	V	R	A	A	K	V	M	H	G	K	T	S	P	I	T	H	N	G	E	G	V	F	R	G	L	A	N	P	L	T	V	T	R	Y	H	S	L	V	V	E	P	D	S	L	P	A	C	F	D	V	T	A	W	S	E	T	R	E
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																																									.	.
Template Conservation																																																																.	.
Template Sequence		A	T	C	A	G	V	I	L	L	A	K	R	I	K	Q	E	K	L	G	V	L	D	I	T	V	E	R	N	A	Y	G	R	Q	V	E	S	F	E	T	F	V	E	I	P	A	V	G	K	D	P	F	R	A	I	F	I	R	A	P	R	I	V	.	.	E	T	G	K	N	V	E	I	L	A	T	Y	D	Y	D	P
Template Known Secondary structure				T																								T	T	T	T		S	G	G	G									G	G	G		S	S							S	S						.	.				S	S								T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	G	I	R	H	R	Q	W	D	L	E	G	V	Q	F	H	P	E	S	I	L	S	E	Q	G	H	Q	L	L	A	N	F	L	H	R
Query Conservation
Alig confidence							.	.	.															.	.	.
Template Conservation							.	.	.															.	.	.
Template Sequence		V	L	V	K	E	.	.	.	G	N	I	L	A	C	T	F	H	P	E	L	T	D	.	.	.	D	L	R	L	H	R	Y	F	L	E	M
Template Known Secondary structure							.	.	.	T	T					S	S		G	G	G	S	S	.	.	.										T	T
Template Predicted Secondary structure							.	.	.															.	.	.
Template SS confidence
		157	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions