Job Description P00903 Confidence 99.97% Date Thu Jan 5 10:57:07 GMT 2012 Rank 28 Aligned Residues 181 % Identity 23% Template c2ad5B_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		D	N	Y	D	S	F	T	W	N	L	Y	Q	Y	F	C	E	L	G	A	D	V	L	V	K	R	N	D	A	L	T	L	A	D	.	.	.	I	D	A	L	K	P	Q	K	I	V	I	S	P	G	P	C	T	P	D	E	A	G	I	S	L	D	V	I	R	H	Y	A	G	R	L	P	I	L	G	V	C	L	G	H
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	D	A	I	L	V	P	G	G	F	G	Y	R	G	V	E	G	M	I	T	T	A	R	F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M
Template Known Secondary structure		G	G	G														T	T																		G	G	G	G	T	T		S										S	T	T														T	T							T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																															.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	A	Q	A	F	G	G	K	V	V	R	A	A	K	V	M	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	S	P	I	T	H	N	G	E	G	V	F	R	G	L	A	N	P	L	T	V	T	R	Y	H	S	L	V	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V	T	M	R	L	G	A	Q	Q	C	Q	L	V	D	D	S	L	V	R	Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y
Template Known Secondary structure												T	T			T	T			B	T	T	T		T	T		S			S				T	T	T				S	S	S																	T	T								T	S	S
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		133	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.														.														.															.
Query SS confidence							.	.	.	.	.	.														.														.															.
Query Sequence		E	P	D	S	L	.	.	.	.	.	.	P	A	C	F	D	V	T	A	W	S	E	T	R	.	E	I	M	G	I	R	H	R	Q	W	D	L	E	.	G	V	Q	F	H	P	E	S	I	L	S	E	Q	G	.	H	Q	L	L	A	N	F	L	H
Query Conservation							.	.	.	.	.	.														.														.															.
Alig confidence							.	.	.	.	.	.														.														.															.
Template Conservation
Template Sequence		E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	D	Q	L	V	E	I	I	E	V	P	N	H	P	W	F	V	A	C	Q	F	H	P	E	F	T	S	T	P	R	D	G	H	P	L	F	A	G	F	V	K
Template Known Secondary structure					G	G	G								T								T	T	T	T								T	T	S	S	S					S	S		G	G	G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions