Job Description P00903 Confidence 39.30% Date Thu Jan 5 10:57:07 GMT 2012 Rank 231 Aligned Residues 72 % Identity 11% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		I	L	L	I	D	N	Y	D	S	F	T	W	N	L	Y	Q	Y	F	C	E	L	G	A	D	V	L	V	K	R	N	.	.	.	D	A	L	T	L	A	D	I	D	A	L	K	P	Q	K	I	V	I	S	P	G	P	C	T	P	D	E	A	G	I	S	L	D	V	I	R	H	Y	A	G	R	L	P	I	L	G	V
Query Conservation																																.	.	.
Alig confidence																																.	.	.																				.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	.	.	.	.	.	.	D	P	R	S	D	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L
Template Known Secondary structure								S													T	S	S						S				T	T	T	T	T	T	T	T	T	S		S				S					S	.	.	.	.	.	.		T	T	T	T											T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		79
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions