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Job DescriptionP31142
Confidence100.00%DateThu Jan 5 11:47:20 GMT 2012
Rank7Aligned Residues259
% Identity24%Templatec3ippA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje; PDBTitle: crystal structure of sulfur-free ynje
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10...... ...20...... ...30.........40.........50.........60.........70.....
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Query Sequence  FVGADWLAEHI. . . . . . . . DDPEIQIIDA. . RMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETF
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Template Sequence  LVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG. . . . . . . . . . APKLYLISHIPGADYIDTNEVE. . . SEPLWNKVSDEQL
Template Known Secondary structure 
T


TT

SS
SS..........S
S
B
TT
GGGT...TTTT

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   145....150.........160.........170...... ...180.........190........ .200.........210.
 
   76...80.........90.........100.........110.........120.........130.........140..... ....150.
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Query Sequence  AVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEF. . . . NAAFNP
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Template Sequence  KAMLAKHGIRHDTTVILYGR. DVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQP
Template Known Secondary structure  TT

TTS
S.ST
S
TT
TT


B
SS









SS
S
S
G
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   212.......220.........230. ........240.........250.........260.........270.........280.........290
 
   152.......160.........170.........180.........190.........200...... ...210.........220...
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Query Sequence  EAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTE. . . . . . . . LVREGELKTTDELDAIF
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Template Sequence  QLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMW
Template Known Secondary structure  GG
TTTT
SS


TS

SSTT



STT




SSTT

GGGB
TTSSB

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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   224.....230.........240.........250.........260.........270........
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Query Sequence  FGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE
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Template Sequence  KAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVA
Template Known Secondary structure  TTT

TTS
SSSTT
SSTTTTSTTS
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   371........380.........390.........400.........410.........420.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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