Job Description P31142 Confidence 99.74% Date Thu Jan 5 11:47:20 GMT 2012 Rank 37 Aligned Residues 109 % Identity 17% Template c3g5jA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630 Resolution 1.76 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	G	A	D	W	L	A	E	H	I	D	D	P	E	I	Q	I	I	D	A	R	M	A	S	P	G	Q	E	D	R	N	V	A	Q	E	Y	L	N	G	H	I	P	G	A	V	F	F	D	I	E	A	L	S	D	H	T	S	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	M	L
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	K	.	.	.	I	E	K	A	L	K	L	D	K	V	I	F	V	D	V	R	.	.	.	.	.	.	.	.	.	.	T	E	G	E	Y	E	E	D	H	I	L	N	A	I	N	X	P	L	F	K	N	N	E	H	N	E	V	G	T	I	Y	K	X	Q	G	K	H	E	A	I	Q	K	G	F	D	Y	V	S
Template Known Secondary structure					.	.	.					T	T		T	T							S	.	.	.	.	.	.	.	.	.	.											T	T						S	S																													G
Template Predicted Secondary structure					.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	P	E	T	F	A	V	A	M	R	E	L	G	V	N	Q	D	K	H	L	I	V	Y	D	E	G	N	L	F	S	A	P	R	A	W	W	M	L	R	T	F	G	V	E	K	V	S	I	L	G	G	G	L	A	G	W	Q	R	D
Query Conservation
Alig confidence															.																															.
Template Conservation															.																															.
Template Sequence		Y	K	L	K	D	I	Y	L	Q	A	A	E	L	.	A	L	N	Y	D	N	I	V	I	Y	C	A	R	G	G	X	R	S	G	S	I	V	N	L	L	S	S	L	G	V	.	N	V	Y	Q	L	E	G	G	Y	K	A	Y	R	N	F
Template Known Secondary structure		G	G												.		T	T		S							S	S	S	S													T	T		.						T	T
Template Predicted Secondary structure															.																															.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions