Job Description P31142 Confidence 99.72% Date Thu Jan 5 11:47:20 GMT 2012 Rank 40 Aligned Residues 95 % Identity 25% Template c3fojA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a. Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	G	A	D	W	L	A	E	H	I	D	D	.	P	E	I	Q	I	I	D	A	R	M	A	S	P	G	Q	E	D	R	N	V	A	Q	E	Y	L	N	G	H	I	P	G	A	V	F	F	D	I	E	A	L	S	D	H	T	S	P	L	P	H	M	L	P	R	P	E	T	F	A	V	A	M	R	E	L	G	V	N
Query Conservation														.
Alig confidence														.										.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	T	E	L	K	E	K	I	L	D	A	N	P	V	N	I	V	D	V	R	.	.	.	.	.	.	.	.	.	.	T	D	Q	E	T	A	X	G	I	I	P	G	A	E	T	I	P	X	N	S	I	P	D	N	L	N	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure										G	G	G	S	S	S								S	.	.	.	.	.	.	.	.	.	.						T	T		B		T	T						G	G	G	G	G	G		G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																				.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	K	H	L	I	V	Y	D	E	G	N	L	F	S	A	P	R	A	W	W	M	L	R	T	F	G	V	E	K	V	S	I	L	G	G	G	L	A	G	W	Q	R	D	D	L	L
Query Conservation
Alig confidence																.														.
Template Conservation																.														.
Template Sequence		D	N	E	T	Y	Y	I	I	C	K	A	G	G	R	.	S	A	Q	V	V	Q	Y	L	E	Q	N	G	V	.	N	A	V	N	V	E	G	G	X	D	E	F	G	D	E	G	L	E
Template Known Secondary structure		T	T	S							S	S	S			.										T	T	T		.						T	T							S	S	S		B
Template Predicted Secondary structure																.														.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions