 |
Job Description | P31142 | Confidence | 99.78% | Date | Thu Jan 5 11:47:20 GMT 2012 |
Rank | 29 | Aligned Residues | 130 |
% Identity | 18% | Template | c3f4aA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:uncharacterized protein ygr203w; |
PDBTitle: structure of ygr203w, a yeast protein tyrosine phosphatase2 of the rhodanese family
|
Resolution | 1.80 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | T | T | W | F | V | G | A | D | W | L | A | E | H | I | D | D | P | E | . |
. |
. |
. |
. |
. |
. |
I | Q | I | I | D | A | R | M | A | S | P | G | Q | E | D | R | N | V | A | Q | E | Y | L | N | G | H | I | P | G | A | V | F | F | D | I | E | A | L | S | D | H | T | S | P | L | P | H | M | L | P | R | P | E |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
Template Sequence |   |
I | T | N | V | K | Y | L | D | P | T | E | L | H | R | W | X | Q | E | G | H | T | T | T | L | R | E | P | F | Q | V | V | D | V | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | D | Y | X | G | G | H | I | K | D | G | W | H | Y | A | Y | S | R | L | K | Q | D | P | E | Y | L | . |
. |
. |
. |
. |
R | E | L |
Template Known Secondary structure |   |
|
| S |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | S |
| T | T | T |
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | S | T | T |
| T | T |
|  |  | T | T |
|  |  |
|
|  |  |  |  |  |  |
|  |  |  |  | . | . | . | . | . |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
. | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | A | V | A | M | R | E | L | G | V | N | Q | D | K | H | L | I | V | Y | D | E | G | N | L | F | S | A | P | R | A | W | W | M | L | R | T | F | . |
. |
. |
. |
. |
. |
G | V | E | K | V | S | I | L | G | G | G | L | A | G | W | Q | R | D | D | L | L | L | E | E | G | A | V | E | L | P | E | G | E | F | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . |
|   |   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
K | H | R | L | L | E | K | Q | A | D | G | R | G | A | L | N | V | I | F | H | C | X | L | S | Q | Q | R | G | P | S | A | A | X | L | L | L | R | S | L | D | T | A | E | L | S | R | C | R | L | W | V | L | R | G | G | F | S | R | W | Q | S | V | Y | G | D | D | E | S | V | T | A | G | Y | L | P | D | L | W | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | S | S | S |
|  |  |  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |  |  | S |
|
| G | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|