Return to main results Retrieve Phyre Job Id

Job DescriptionP31142
Confidence55.73%DateThu Jan 5 11:47:20 GMT 2012
Rank143Aligned Residues38
% Identity16%Templatec2hjvB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260........
Predicted Secondary structure 















Query SS confidence 






































Query Sequence  YDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSE
Query Conservation      




 

 

      
   
   
  
 

  
Alig confidence 



























.









Template Conservation     
 


         
   
      .          
Template Sequence  NPDSCIIFCRTKEHVNQLTDELDDLGYP. CDKIHGGMIQ
Template Known Secondary structure 

SS
SSTT

.

TTS
Template Predicted Secondary structure 








.




Template SS confidence 






































   239240.........250.........260...... ...270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions