Job Description P0A9H7 Confidence 96.87% Date Wed Jan 25 15:20:19 GMT 2012 Rank 342 Aligned Residues 146 % Identity 15% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		121	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.
Predicted Secondary structure											.	.	.	.																																																														.	.	.	.
Query SS confidence											.	.	.	.																																																														.	.	.	.
Query Sequence		D	L	G	N	D	L	F	S	R	.	.	.	.	M	L	D	P	F	M	Q	Y	S	C	A	Y	W	K	D	A	D	N	L	E	S	A	Q	Q	A	K	L	K	M	I	C	E	K	L	Q	L	K	P	G	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	.	.	.	.	V	S
Query Conservation											.	.	.	.																																																														.	.	.	.
Alig confidence											.	.	.	.							.																										.																													.	.	.	.
Template Conservation																					.																										.
Template Sequence		I	L	T	G	D	E	L	A	E	L	I	H	D	I	A	T	R	G	R	.	G	H	E	G	V	V	P	T	D	I	E	L	G	K	V	L	S	I	I	S	Q	H	I	L	G	.	R	P	L	T	E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q
Template Known Secondary structure				S	S												T	T	S		.				B	S	S	S																			.	S				T	T						T	T		T	T	S									T	S	T	T			G	G	G
Template Predicted Secondary structure																					.																										.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.													.	.	.	.																	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.													.	.	.	.																	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q	E	R	C	E	G	L	D	.	.	.	.	.	.	.	.	.	V	T	I	L	L	Q	D	Y	R	D	L	N	.	.	.	.	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	.	.	.	.	P	K	N	Y	D	T	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.													.	.	.	.																	.	.	.	.							.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.													.	.	.	.																	.	.	.	.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T	I	T	G	E	D	V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T
Template Known Secondary structure							S		G	G	G										T	T	S	T	T	T		B	T	T	B									G	G	G			G	G	G	G	T	T									B			S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
																		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A	I	X	P
Template Known Secondary structure		S	S			S	S		S	S	S															S		T	T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions