Job Description P0A9H7 Confidence 99.40% Date Wed Jan 25 15:20:19 GMT 2012 Rank 229 Aligned Residues 117 % Identity 17% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																.	.									.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.									.	.	.	.	.	.	.	.
Query Sequence		L	K	P	G	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	V	S	V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q	E	R	C	E	G	L	D	V	T	I	L	L	Q	D	Y	R	D	L	N	.	.	D	Q	F	D	R	I	V	S	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.									.	.	.	.	.	.	.	.
Alig confidence																									.	.																					.	.	.	.	.	.												.	.									.	.	.	.	.	.	.	.
Template Conservation																									.	.																					.	.	.	.	.	.
Template Sequence		G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	.	.	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	N	L	V	R	A	D	L	L	C	S	I	N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T
Template Known Secondary structure		T			S							T		T	T								T	T	.	.	T	S							S							T		S	S	S	.	.	.	.	.	.						S	T	T	T	T	S		G	G	G		S									B	T	T
Template Predicted Secondary structure																									.	.																					.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	G	M	F	E	H	V	G	P	K	N	Y	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T	I	G	S	K	K	T	D	L	N	V	D	P	W	I	N	K	Y	I	F	P	N	G	C	L	P	S	V	R	Q	I	A	Q	S	S	E	P	H	F	V	M	E	D	W	H	N
Query Conservation		.
Alig confidence		.								.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	P	I	I	G	G	G	.	.	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	E	A	N	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V
Template Known Secondary structure				T	T	T	B			.	.	G	G	G													S	S								G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions