Job Description P0A9H7 Confidence 95.71% Date Wed Jan 25 15:20:19 GMT 2012 Rank 355 Aligned Residues 147 % Identity 22% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.				.	.	200	.
Predicted Secondary structure																		.	.														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Query SS confidence																		.	.														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Query Sequence		W	K	D	A	D	N	L	E	S	A	Q	Q	A	K	L	K	.	.	M	I	C	E	K	L	Q	L	K	P	G	M	R	.	.	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	S	V	V	G	V	T	.	.	.	I	S	A	E
Query Conservation																		.	.														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Alig confidence																		.	.														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		F	S	N	E	D	G	L	E	E	T	H	H	V	F	L	K	G	N	G	F	P	A	R	F	A	S	H	P	Q	Q	S	C	I	F	A	E	T	G	F	G	T	G	L	N	F	L	T	L	W	R	D	F	A	L	F	R	Q	Q	S	P	N	A	T	L	R	R	L	H	Y	I	S	F	E	K	Y	P	L	H	V	A
Template Known Secondary structure				S	T	T	S								T	T	T	T	T	T	T	T								S	S										T	T	S																		T	T	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.																													.	.	.	.	.	220	.	.	.	.	.									.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		Q	Q	K	M	A	Q	E	R	C	E	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	L	L	Q	D	Y	R	D	L	.	.	.	.	.	.	.	.	N	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	P	K	N
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.															.	.
Template Conservation																																																																												.	.
Template Sequence		D	L	A	S	A	H	A	R	W	P	E	L	A	S	F	A	E	Q	L	R	A	Q	W	P	L	P	L	A	G	C	H	R	I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	L	N	N	Q	V	D	A	W	F	L	D	G	F	A	P	.	.	N	P	D	X
Template Known Secondary structure								T	T		G	G	G										T						S								T	T	T	T								S						G	G	G			G	G	G	T	T									S	S			.	.			T	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.
		246		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Y	.	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T	I	G	S	K	K	T	D	L	N	V	D	P	W	I	N	K	Y	I	F	P	N	G	C	L	P	S	V	R	Q	I	A	Q	S	S	E	P	H	F	V	M	E	D	W	H	N	F	G
Query Conservation			.
Alig confidence			.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	N	E	Q	L	F	N	A	X	A	R	X	T	R	P	G	G	T	F	S	T	F	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	R	R	G	L	Q	Q	A	G	F	N	V	T	K	V	K	G	F	G
Template Known Secondary structure			S																				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions