|   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
. | . | . | . | . | . | . | . | 200 | |
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | S | A | Q | Q | A | K | L | K | M | I | C | E | K | L | Q | L | K | P | G | M | R | V | L | D | I | G | C | G | W | G | G | L | A | H | Y | M | A | S | N | Y | D | V | . |
S | V | V | G | V | T | I | S | A | . |
. |
. |
E | Q | Q | K | M | A | Q | E | R | C | E | G | L | D | V | T | I | L | L | Q | D | Y | R |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   | . |   |
|   |
|
|
|
|
|   | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
X | V | R | L | S | Q | P | X | V | D | V | V | S | E | L | G | V | F | A | R | A | R | T | V | I | D | L | A | G | G | H | G | T | Y | L | A | Q | V | L | R | R | H | P | Q | L | T | G | Q | I | W | D | L | P | T | T | R | D | A | A | R | K | T | I | H | A | H | D | L | G | G | R | V | E | F | F | E | K | N | L | L |
Template Known Secondary structure |   |
 |  |  |  | T |  |  |  |  |  |  |  |  | T |
| G | G | G | T | T |
| S |  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
224 | . | . | |
|
|
|
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | N | . |
. |
. |
. |
D | Q | F | D | R | I | V | S | V | G | M | F | E | H | V | G | P | K | N | Y | D | T | Y | F | A | V | V | D | R | N | L | K | P | E | G | I | F | L | L | H | T | I | G | S | K | K | T | D | L | N | V | D | P | W | I | N | K | Y | I | F | . |
. |
. |
. |
. |
P | N | G | C | L | P | S | V |
Query Conservation |   |
  |   |   | . | . | . | . |   |   |
|
|   |
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
| . | . | . | . | . |
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
D | A | R | N | F | E | G | G | A | A | D | V | V | X | L | N | D | C | L | H | Y | F | D | A | R | E | A | R | E | V | I | G | H | A | A | G | L | V | K | P | G | G | A | L | L | I | L | T | X | T | X | N | D | D | R | V | T | P | A | L | S | A | D | F | S | L | H | X | X | V | N | T | N | H | G | E | L | H | P | T |
Template Known Secondary structure |   |
| G | G | G | G | T | T |
|
|  |  |  |  |  |  |  | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
  |   |
295 | . | . | . | . | |
300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
 |  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | I | A | Q | . |
S | S | E | P | H | F | V | M | E | D | W | H |
Query Conservation |   |
  |   |
|   |   | . |   |   |   |   |
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
P | W | I | A | G | V | V | R | D | A | G | L | A | V | G | E | R | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |