 |
Job Description | P0A9H7 | Confidence | 87.58% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 414 | Aligned Residues | 64 |
% Identity | 22% | Template | c3hn7A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; |
PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution
|
Resolution | 1.65 Å |
|
 |
  |   |
168 | . | 170 | . | . | . | . | . | |
. | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | M | R | V | L | D | I | G | . |
C | G | W | G | G | L | A | . |
H | Y | M | A | S | N | Y | D | V | S | V | V | G | V | T | I | S | A | E | Q | Q | K | M | A | Q | E | R | C | E | G | L | D | V | T | I | L | L | . |
Q | D | Y | R | D | L | N | D | Q | F | D | R | I | V |
Query Conservation |   |
|   |
|
|
|
|
|
| . |
|
|   |
|   |   |
| . |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
G | X | H | I | H | I | L | G | I | C | G | T | F | X | G | S | L | A | L | L | A | R | A | L | G | H | T | V | T | G | S | D | A | N | I | . |
. |
Y | P | P | X | S | T | Q | L | E | Q | A | G | V | T | I | E | E | G | Y | L | I | A | H | L | Q | P | A | P | D | L | V | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|
| . | . |
| T | T |  |  |  |  |  |  |  | T | T |
|  |  |  |  | S |
|
| G | G | G | G |
| S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|