 |
Job Description | P0A9H7 | Confidence | 99.41% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 226 | Aligned Residues | 106 |
% Identity | 19% | Template | c3gdhC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:trimethylguanosine synthase homolog; |
PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
|
Resolution | 2.00 Å |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |
|
|  |  |  |  |
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
Q | A | K | L | K | M | I | C | E | K | L | . |
Q | L | K | P | G | M | R | V | L | D | I | G | C | G | W | G | G | L | A | H | Y | M | A | S | N | Y | D | V | S | V | V | G | V | T | I | S | A | E | Q | Q | K | M | A | Q | E | R | C | E | G | L | D | . |
. |
. |
. |
V | T | I | L | L | Q | D | Y | R | D | L | N | . |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
| . |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |
|   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   | . |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
E | K | I | A | E | H | I | A | G | R | V | S | Q | S | F | K | C | D | V | V | V | D | A | F | C | G | V | G | G | N | T | I | Q | F | A | L | T | G | M | . |
R | V | I | A | I | D | I | D | P | V | K | I | A | L | A | R | N | N | A | E | V | Y | G | I | A | D | K | I | E | F | I | C | G | D | F | L | L | L | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  | S |
|  |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
675 | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | |
. | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . |
  |
  |   |
|
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
. |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
D | Q | F | D | R | I | V | S | V | G | M | F | E | H | V | G | P | K | N | Y | D | T | Y | F | A | V | V | D | R | N | L | K | P | E | G |
Query Conservation |   |
. |   |   |
|
|   |
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
F | L | K | A | D | V | V | F | L | S | P | P | W | G | G | P | . |
. |
D | Y | A | T | A | E | T | F | D | I | R | T | M | M | S | P | D | G |
Template Known Secondary structure |   |
G |
|
|
| S |  |  |  |  |
|
|
|
|
| S | G | . | . | G | G | G | G | S | S | S | B |
| T | T | T | S | S | S | S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
754 | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | |
|
770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|