Job Description P0A9H7 Confidence 99.40% Date Wed Jan 25 15:20:19 GMT 2012 Rank 228 Aligned Residues 117 % Identity 22% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																													.																				.	.	.	.	.	.	.
Query SS confidence																																													.																				.	.	.	.	.	.	.
Query Sequence		E	S	A	Q	Q	A	K	L	K	M	I	C	E	K	L	Q	L	K	P	G	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	V	.	S	V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q	E	R	C	.	.	.	.	.	.	.	E	G	L	D	V	T	I	L	L	Q
Query Conservation																																													.																				.	.	.	.	.	.	.
Alig confidence																						.																							.																				.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		E	F	V	Y	H	E	V	L	G	H	T	S	L	C	S	H	P	K	P	E	.	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G
Template Known Secondary structure															T	T	S	S				.								T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S
Template Predicted Secondary structure																						.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		221	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		D	Y	R	D	L	.	.	.	.	.	N	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	P	K	N	Y	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.										.
Template Conservation																					.
Template Sequence		D	G	L	A	F	V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	.	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N	Q	G
Template Known Secondary structure									T	S		T	T								.			S						S	S
Template Predicted Secondary structure																					.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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