Job Description P0A9H7 Confidence 97.74% Date Wed Jan 25 15:20:19 GMT 2012 Rank 309 Aligned Residues 216 % Identity 16% Template c3b5iB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl PDBTitle: crystal structure of indole-3-acetic acid methyltransferase Resolution 2.75 Å

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		151	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure							.	.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	Q	A	K	.	.	L	K	M	I	C	E	K	L	Q	L	K	P	G	.	.	.	.	.	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q
Query Conservation							.	.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	S	M	L	H	L	L	E	E	T	L	E	N	V	H	L	N	S	S	A	S	P	P	P	F	T	A	V	D	L	G	C	S	S	G	A	N	T	V	H	I	I	D	F	I	V	K	H	I	S	K	R	F	D	A	A	G	I	D	P	P	E	F	T	A	F	F	S	D	L	P	S	N	D	F	N	T	L	F
Template Known Secondary structure															T	S					S	S	S										T			S	S	S																				T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.										.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	C	E	G	L	D	.	.	.	.	.	.	.	.	.	V	T	I	L	L	Q	D	Y	R	D	.	.	.	L	N	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	L	P	P	L	V	S	N	D	G	N	R	S	Y	F	V	A	G	V	P	G	S	F	Y	R	R	L	F	P	A	R	T	I	D	F	F	H	S	A	F	S	L	H	W	L	S	Q	V	P	E	S	V	T	D	R	R	S	A	A	Y	N	R	G	R	V	F	I	H	G	A	G	E	K	T	T	T	A	Y	K
Template Known Secondary structure				S			B							B		S							S		T	T	S			S		T	T									S		T	T	B		S	S			G	G	G	G		T	T	S	T	T			T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
						244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																										.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	K	N	Y	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T	I	G	S	K	K	T	D	L	N	V	D	P	W	I	N	K	Y	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G	C	L	P	S	V
Query Conservation		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	F	Q	A	D	L	A	E	F	L	R	A	R	A	A	E	V	K	R	G	G	A	M	F	L	V	C	L	G	R	T	S	V	D	P	T	D	Q	G	G	A	G	L	L	F	G	T	H	F	Q	D	A	W	D	D	L	V	R	E	G	L	V	A	A	E	K	R	D	G	F	N	I	P	V	Y	A	P	S	L
Template Known Secondary structure																																			S	S	T	T										S	S							T	T	T	T	S	S	S	S	S						S	S					B
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		295	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.																		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		R	Q	I	A	Q	S	.	.	S	E	P	H	F	V	M	E	D	W	H	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	Y	D	T	T	L	M	A	W	Y	E	R	F	L	A	A	.	.	W	P	E	I	A	D	N	Y	S	E	R	F	K	R	M	F	T	Y	Y	L	N	A
Query Conservation								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		Q	D	F	K	E	V	V	D	A	N	G	S	F	A	I	D	K	L	V	V	Y	K	G	G	S	P	L	V	V	N	E	P	D	D	A	S	E	V	G	R	A	F	A	S	S	C	R	S	V	A	G	V	L	V	E	A	H	I	G	E	E	L	S	N	K	L	F	S	R	V	E	S	R	A	T	S	H	A	K	D
Template Known Secondary structure													S																		S	S	T	T																							T	T	S									T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	G	A	F	R	A	R	D	I	Q	L	W	Q	V	V	F	S
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		V	L	.	.	.	.	.	V	N	L	Q	F	F	H	I	V	A	S
Template Known Secondary structure				.	.	.	.	.	T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		358	.						360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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