 |
Job Description | P0A9H7 | Confidence | 99.68% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 153 | Aligned Residues | 104 |
% Identity | 19% | Template | c2yxdA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable cobalt-precorrin-6y c(15)-methyltransferase |
PDBTitle: crystal structure of cobalamin biosynthesis precorrin 8w decarboxylase2 (cbit)
|
Resolution | 2.30 Å |
|
 |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | |
|
. | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |
|
|  |  |  |  |
| . | . |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
K | M | I | C | E | K | L | Q | L | K | P | G | M | R | V | L | D | I | G | C | G | W | G | G | L | A | H | Y | M | A | S | N | Y | D | V | S | V | V | G | V | T | I | S | A | E | Q | Q | K | M | A | Q | E | R | C | E | G | L | D | . |
. |
. |
V | T | I | L | L | Q | D | Y | R | D | L | N | . |
. |
D | Q | F | D | R |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |
|   |   |   |   |   | . | . |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   | . |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | V | S | I | G | K | L | N | L | N | K | D | D | V | V | V | D | V | G | C | G | S | G | G | X | T | V | E | I | A | K | R | C | K | . |
F | V | Y | A | I | D | Y | L | D | G | A | I | E | V | T | K | Q | N | L | A | K | F | N | I | K | N | C | Q | I | I | K | G | R | A | E | D | V | L | D | K | L | E | F | N | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  | T | T | S | S | . |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | S |
|  |  |  |  | G | G | G |
|
|
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | S | V | G | M | F | E | H | V | G | P | K | N | Y | D | T | Y | F | A | V | V | D | R | N | L | K | P | E | G | I | F | L | L | H | T | I | G |
Query Conservation |   |
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   | . | . |   |
|
|
|   |
|
|   |   |   |   |   |
Template Sequence |   |
A | F | I | G | G | T | K | N | I | . |
. |
. |
. |
. |
. |
E | K | I | I | E | I | L | D | K | . |
. |
K | K | I | N | H | I | V | A | N | T | I | V |
Template Known Secondary structure |   |
 |  |  |
| S |
| S |
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | T | T |
|
|  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 120 | . | |
|
. | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|