Job Description P0A9H7 Confidence 97.08% Date Wed Jan 25 15:20:19 GMT 2012 Rank 333 Aligned Residues 131 % Identity 19% Template c2qy6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0209 protein yfck; PDBTitle: crystal structure of the n-terminal domain of upf0209 protein yfck2 from escherichia coli o157:h7 Resolution 2.00 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190														.	.	.	.	.	.
Predicted Secondary structure																										.	.												.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.												.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	Q	Y	S	C	A	Y	W	K	D	A	D	N	L	E	S	A	Q	Q	A	K	L	K	.	.	M	I	C	E	K	L	Q	L	K	P	G	.	.	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	V	G	V
Query Conservation																										.	.												.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.												.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	D	F	D	D	V	Y	F	S	N	D	N	G	L	E	E	T	R	Y	V	F	L	G	G	N	Q	L	E	A	R	F	P	E	H	P	H	P	L	F	V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F
Template Known Secondary structure			T	T	T	T			S	S		T	T	T													T	T					G	G	G		S	S	S							S			T	T	S																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		197				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																											.	.	.	.	.	220	.	.	.	.	.									.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	I	S	A	E	Q	Q	K	M	A	Q	E	R	C	E	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	L	L	Q	D	Y	R	D	L	.	.	.	.	.	.	.	.	N	D	Q	F	D	R	I	V	S	V	G	M	F	E
Query Conservation			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L	Q	A	Q	W	P	M	P	L	P	G	C	H	R	L	L	L	D	R	V	T	L	D	L	W	F	G	D	I	N	E	L	I	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	D	G	F	A	P
Template Known Secondary structure			S	S												T	T		G	G	G										T				S		S																	S						G	G	G	S		G	G	G	T	T									S	S		T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		H	V	G	P	K	N	Y	.	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		A	K	N	P	D	M	W	T	Q	N	L	F	N	A	M	A	R	L	A	R	P	G	G	T	L	A
Template Known Secondary structure		T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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