Job Description P0A9H7 Confidence 99.37% Date Wed Jan 25 15:20:19 GMT 2012 Rank 233 Aligned Residues 121 % Identity 21% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	M	L	D	P	F	M	Q	Y	S	C	A	Y	W	K	D	A	D	N	L	E	S	A	Q	Q	A	K	L	K	M	I	C	E	K	L	Q	L	K	P	G	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	V	.	S	V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q
Query Conservation																																																																	.
Alig confidence												.	.	.	.	.	.	.																							.																								.
Template Conservation												.	.	.	.	.	.	.																							.
Template Sequence		L	V	L	D	G	V	I	Q	L	T	.	.	.	.	.	.	.	E	K	D	E	F	A	Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	.	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K
Template Known Secondary structure					T	T						.	.	.	.	.	.	.	T	T	T																S	S	S		.									T	T									T		T	T									S
Template Predicted Secondary structure												.	.	.	.	.	.	.																							.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		208	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																.	.	.	.
Query Sequence		E	R	C	.	.	.	.	.	.	.	E	G	L	D	V	T	I	L	L	Q	D	Y	R	D	L	.	.	.	.	N	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	P	K	N	Y	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T
Query Conservation					.	.	.	.	.	.	.																.	.	.	.
Alig confidence					.	.	.	.	.	.	.																.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	V	T	N	T	Y	D	V	I	I	V	D	.	.	.	.	.	.	.	.	.	.	S	S	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C
Template Known Secondary structure									G	G	G	G	S	T	T						S							T	T			S									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions