Job Description P0A9H7 Confidence 99.52% Date Wed Jan 25 15:20:19 GMT 2012 Rank 199 Aligned Residues 127 % Identity 18% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																											.																						.
Query SS confidence																																																											.																						.
Query Sequence		M	Q	Y	S	C	A	Y	W	K	D	A	D	N	L	E	S	A	Q	Q	A	K	L	K	M	I	C	E	K	L	Q	L	K	P	G	M	R	V	L	D	I	G	C	G	W	G	G	L	A	H	Y	M	A	S	N	Y	D	V	.	S	V	V	G	V	T	I	S	A	E	Q	Q	K	M	A	Q	E	R	C	E	G	.
Query Conservation																																																											.																						.
Alig confidence																																			.																								.																						.
Template Conservation																																			.
Template Sequence		V	L	V	L	D	G	V	I	Q	L	T	E	K	D	E	F	A	Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	.	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I
Template Known Secondary structure						T	T						T	T	T														T	T	S	S	S		.									T	T									T		T	T									S
Template Predicted Secondary structure																																			.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
								213	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.	.	.	.
Query SS confidence		.	.	.	.	.	.														.	.	.	.
Query Sequence		.	.	.	.	.	.	L	D	V	T	I	L	L	Q	D	Y	R	D	L	.	.	.	.	N	D	Q	F	D	R	I	V	S	V	G	M	F	E	H	V	G	P	K	N	Y	D	T	Y	F	A	V	V	D	R	N	L	K	P	E	G	I	F	L	L	H	T	I	G
Query Conservation		.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.	.										.	.	.	.	.						.	.
Template Conservation																																		.	.	.	.	.						.	.
Template Sequence		S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	V	T	N	T	Y	D	V	I	I	V	.	.	.	.	.	D	S	S	D	N	.	.	Q	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S
Template Known Secondary structure			G	G	G	G	S	T	T						S								T			S								.	.	.	.	.						.	.
Template Predicted Secondary structure																																		.	.	.	.	.						.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions