 |
Job Description | P0A9H7 | Confidence | 98.93% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 269 | Aligned Residues | 104 |
% Identity | 22% | Template | c1aqjB_ |
PDB info |
PDB header:methyltransferase | Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi; |
PDBTitle: structure of adenine-n6-dna-methyltransferase taqi
|
Resolution | 2.60 Å |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
|
. | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
| . | . |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
L | K | M | I | C | E | K | L | Q | L | K | P | G | M | R | V | L | D | I | G | C | G | W | G | G | L | A | H | Y | M | A | S | N | . |
. |
Y | D | V | S | V | V | G | V | T | I | S | A | E | Q | Q | K | M | A | Q | E | R | C | E | G | L | D | V | T | I | L | L | Q | D | Y | R | D | L | N | . |
. |
D | Q | F | D | R |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   | . | . |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   | . | . |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
V | D | F | M | V | S | L | A | E | A | P | R | G | G | R | V | L | E | P | A | C | A | H | G | P | F | L | R | A | F | R | E | A | H | G | T | G | Y | R | F | V | G | V | E | I | D | P | K | A | L | D | L | P | P | W | A | . |
. |
. |
. |
. |
. |
E | G | I | L | A | D | F | L | L | W | E | P | G | E | A | F | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S |
| S |  |  |  |  |  |  | S |
| T | T | T |
|
|
|
| T | T |  | . | . | . | . | . | . |  |  |  |  | S |
| T | T | T |
|
|
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | S | V | G | M | F | E | H | V | G | P | K | N | Y | D | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | F | A | V | V | D | R | N | L | K | P | E | G | I | F | L | L |
Query Conservation |   |
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|   |
|   |   |
Template Sequence |   |
I | L | G | N | P | P | Y | G | I | V | F | K | A | V | K | D | L | Y | K | K | A | F | S | T | W | K | G | K | Y | N | L | Y | G | A | F | L | E | K | A | V | R | L | L | K | P | G | G | V | L | V | F |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| S |
|
|
| T |  |  |  |  |  |  |  |  |  |
| T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|