Job Description P42904 Confidence 10.24% Date Thu Jan 5 12:02:02 GMT 2012 Rank 83 Aligned Residues 87 % Identity 14% Template c3n2bD_ PDB info PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. Resolution 1.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		Q	N	L	M	E	M	V	L	A	E	G	I	A	V	R	F	W	T	L	Q	K	V	I	D	N	I	H	R	A	A	D	R	Q	K	I	L	L	V	.	.	C	K	T	P	A	D	F	L	T	L	V	K	G	G	V	P	V	N	R	I	N	V	G	N	M	H	Y	A	N	G	K	Q	Q	I	A	K	T	V	S	V
Query Conservation																																								.	.
Alig confidence																																								.	.																		.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	V	L	N	T	L	A	R	L	G	S	G	F	D	I	V	S	V	G	E	L	E	R	V	L	A	A	G	G	D	P	S	K	V	V	F	S	G	V	G	K	T	E	A	E	M	K	R	A	L	Q	L	K	I	K	C	.	.	F	N	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T						S	S										T	T			G	G	G						T	T												T	T		S		.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		D	A	G	D	I	A	A	F	N	D	L	K	T	A	.	.	.	G	V	E	C	F	V	Q	G	V	P	T	E	P	A
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		S	E	P	E	L	Q	R	L	N	K	V	A	G	E	L	G	V	K	A	P	I	S	L	R	I	N	P	D	V	D	A
Template Known Secondary structure		S															T									B						T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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