Job Description P42904 Confidence 11.08% Date Thu Jan 5 12:02:02 GMT 2012 Rank 75 Aligned Residues 80 % Identity 10% Template c3h6hB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2; PDBTitle: crystal structure of the glur6 amino terminal domain dimer assembly2 mpd form Resolution 2.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																.	.	.	.														.
Query SS confidence																																																.	.	.	.														.
Query Sequence		G	Q	V	G	V	Q	W	V	G	F	A	G	A	N	L	V	L	V	A	N	D	E	V	A	E	D	P	V	Q	Q	N	L	M	E	M	V	L	A	E	G	I	A	V	R	F	W	.	.	.	.	T	L	Q	K	V	I	D	N	I	H	R	A	A	.	D	R	Q	K	I	L	L	V	C	K	T	P	A	D	F	L
Query Conservation																																																.	.	.	.														.
Alig confidence																																																.	.	.	.														.
Template Conservation
Template Sequence		S	R	A	I	L	D	L	V	Q	F	F	K	W	K	T	V	T	V	V	Y	D	D	S	T	G	L	I	R	L	Q	E	L	I	K	A	P	S	R	Y	N	L	R	L	K	I	R	Q	L	P	A	D	T	K	D	A	K	P	L	L	K	E	M	K	R	G	K	E	F	H	V	I	F	D	C	S	H	E	M	A	A
Template Known Secondary structure												T	T		S							S	S	T						S					T	G	G	G	T	S	S										S	S	G	G	G											T	T								S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		91	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	L	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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