Job Description P42904 Confidence 10.69% Date Thu Jan 5 12:02:02 GMT 2012 Rank 78 Aligned Residues 83 % Identity 14% Template c3cpqB_ PDB info PDB header:ribosomal protein Chain: B: PDB Molecule:50s ribosomal protein l30e; PDBTitle: crystal structure of l30e a ribosomal protein from2 methanocaldococcus jannaschii dsm2661 (mj1044) Resolution 1.90 Å

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		12	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																														.	.
Query SS confidence							.																																														.	.
Query Sequence		R	L	I	H	G	.	Q	V	G	V	Q	W	V	G	F	A	G	A	N	L	V	L	V	A	N	D	E	V	A	E	D	P	V	Q	Q	N	L	M	E	M	V	L	A	E	G	I	A	V	R	F	W	.	.	T	L	Q	K	V	I	D	N	I	H	R	A	A	D	R	Q	K	I	L	L	V	C	K	T	P	A	D
Query Conservation							.																																														.	.
Alig confidence							.																						.	.																							.	.
Template Conservation																													.	.
Template Sequence		K	V	I	L	G	S	K	R	T	I	K	F	V	K	H	G	E	G	K	L	V	V	L	A	G	N	I	.	.	P	K	D	L	E	E	D	V	K	Y	Y	A	K	L	S	N	I	P	V	Y	Q	H	K	I	T	S	L	E	L	G	A	V	C	G	K	P	F	P	V	A	A	L	L	V	L	D	E	G	L	S	N
Template Known Secondary structure						S										T	T			S						T	T		.	.															T	T								S									T	T		S	S			S								T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	L	V	K	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	E	L	V	E	K	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions