Job Description P42904 Confidence 12.46% Date Thu Jan 5 12:02:02 GMT 2012 Rank 61 Aligned Residues 83 % Identity 10% Template c2zkr6_ PDB info PDB header:ribosomal protein/rna Chain: 6: PDB Molecule:60s ribosomal protein l30e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		11	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure									.																																													.	.
Query SS confidence									.																																													.	.
Query Sequence		E	R	L	I	H	G	Q	.	V	G	V	Q	W	V	G	F	A	G	A	N	L	V	L	V	A	N	D	E	V	A	E	D	P	V	Q	Q	N	L	M	E	M	V	L	A	E	G	I	A	V	R	F	W	.	.	T	L	Q	K	V	I	D	N	I	H	R	A	A	D	R	Q	K	I	L	L	V	C	K	T	P	A
Query Conservation									.																																													.	.
Alig confidence									.																				.	.																								.	.
Template Conservation																													.	.
Template Sequence		G	K	Y	V	L	G	Y	K	Q	T	L	K	M	I	R	Q	G	K	A	K	L	V	I	L	A	N	N	.	.	C	P	A	L	R	K	S	E	I	E	Y	Y	A	M	L	A	K	T	G	V	H	H	Y	S	G	N	N	I	E	L	G	T	A	C	G	K	Y	Y	R	V	C	T	L	A	I	I	D	P	G	D	S
Template Known Secondary structure		T					S											T									T	T	.	.			S	S	T	T	T										T								S										T		S	S			S						S	S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		88	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	T	L	V	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	I	R	S	M	P	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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